Next to the usual configuration script, there is an alternative way to build xca. At least on unix, one can use qmake to create a makefile for building. Maybe this will help ,if you have a weired setup. $ qmake -o makefile creates the makefile. I recommend makefile to not overwrite Makefile and also assures, that it is used instead of the original Makefile. Now you need to create the file Local.h $ cat >local.h < #define PREFIX "/usr/local" > #define ETC "/etc/xca" > #define VER "0.6.2" > EOF or you call ./configure to create it for you. now just build XCA with $ make