# The netCDF interface is mostly written in C; this module only # adds some luxury and puts everything in its proper place in the # package hierarchy. # # Written by Konrad Hinsen # Last revision: 2006-6-23 # """ Python interface to the netCDF library """ import sys if sys.modules.has_key('epydoc'): # Fake code just for the docstrings! from Scientific_netcdf import _C_API class NetCDFFile: """ X{netCDF} file A NetCDFFile object has two standard attributes: 'dimensions' and 'variables'. The values of both are dictionaries, mapping dimension names to their associated lengths and variable names to variables, respectively. Application programs should never modify these dictionaries. All other attributes correspond to global attributes defined in the netCDF file. Global file attributes are created by assigning to an attribute of the NetCDFFile object. """ def __init__(self, *args): """ @param filename: name of the netCDF file. By convention, netCDF files have the extension ".nc", but this is not enforced. The filename may contain a home directory indication starting with "~". @type filename: C{str} @param mode: access mode. "r" means read-only; no data can be modified. "w" means write; a new file is created, an existing file with the same name is deleted. "a" means append (in analogy with serial files); an existing file is opened for reading and writing, if the file does not exist it is created. "r+" is similar to "a", but the file must already exist. An "s" can be appended to any of the modes listed above; it indicates that the file will be opened or created in "share" mode, which reduces buffering in order to permit simultaneous read access by other processes to a file that is being written. @type mode: C{str} """ raise ImportError("this code should never be executed") def close(self): """ Close the file. Any read or write access to the file or one of its variables after closing raises an exception. """ pass def createDimension(self, name, length): """ @param name: the name of the dimension @type name: C{str} @param length: the length of the new dimension. C{None} stands for the unlimited dimension. Note that there can be only one unlimited dimension per file. @type length: C{int} or C{NoneType} """ pass def createVariable(self, name, type, dimensions): """ @param name: the name of the new variable @type name: C{str} @param type: the data type of the elements; the same one-letter codes as in C{Numeric} are used and the use of the pre-defined constants (Numeric.Float etc.) is strongly recommended. @type type: C{str} @param dimensions: a tuple of dimension names that have been defined earlier @type dimensions: C{tuple} of C{str} @returns: the object corresponding to the new variable @rtype: L{NetCDFVariable} """ pass def sync(self): """ Write all buffered data to the disk file. """ flush = sync class NetCDFVariable: """ Variable in a netCDF file NetCDFVariable objects are constructed by calling the method 'createVariable' on the L{NetCDFFile} object. NetCDFVariable objects behave much like array objects defined in module Numeric, except that their data resides in a file. Data is read by indexing and written by assigning to an indexed subset; the entire array can be accessed by the index '[:]' or using the methods 'getValue' and 'assignValue'. NetCDFVariable objects also have attribute "shape" with the same meaning as for arrays, but the shape cannot be modified. There is another read-only attribute "dimensions", whose value is the tuple of dimension names. All other attributes correspond to variable attributes defined in the netCDF file. Variable attributes are created by assigning to an attribute of the NetCDFVariable object. B{Note:} If a file open for reading is simultaneously written by another program, the size of the unlimited dimension may change. Every time the shape of a variable is requested, the current size will be obtained from the file. For reading and writing, the size obtained during the last shape request is used. This ensures consistency: foo[-1] means the same thing no matter how often it is evaluated, as long as the shape is not re-evaluated in between. """ def __init__(self, *args): raise ImportError("this code should never be executed") def assignValue(self, value): """ Assign a new value to the variable. This method allows assignment to scalar variables, which cannot be indexed. @param value: the new value for the variable """ pass def getValue(self): """ Return the value of the variable. This method allows access to scalar variables, which cannot be indexed. @returns: the current value of the variable """ pass def typecode(self): """ @returns: the variable's type code @rtype: C{str} """ pass else: # This is the real code. from Scientific_netcdf import * from Scientific_netcdf import _C_API import os _NetCDFFile = NetCDFFile def NetCDFFile(filename, mode=None, history=None): filename = os.path.expanduser(filename) args = (filename,) if mode is not None: args = args + (mode,) if history is not None: args = args + (history,) return apply(_NetCDFFile, args) del sys