#!/bin/csh # # Demonstrate stereo3d script by making stereo pair of # view down pore of LT B-pentamer # if (! $?TMPDIR) setenv TMPDIR /tmp ; endif # # First we make a VDW model of the B-pentamer itself # grep ' [DEFGH] ' LT.pdb > $TMPDIR/$$_temp.r3d cat chaincolours.pdb $TMPDIR/$$_temp.r3d | balls -h > $TMPDIR/$$_balls.r3d # # Now we make a simple ribbon for the A2 domain # grep ' C ' LT.pdb | ribbon -h -d1 > $TMPDIR/$$_ribbon.r3d # # put 'em together with a view matrix # cat header8.r3d $TMPDIR/$$_balls.r3d $TMPDIR/$$_ribbon.r3d > $TMPDIR/$$_example8.r3d # # Now render it as a stereo pair # Add a gamma correction before displaying # stereo3d -png < $TMPDIR/$$_example8.r3d | display -gamma 1.2 png:- # # # Clean up # rm -f $TMPDIR/$$_temp.r3d $TMPDIR/$$_balls.r3d $TMPDIR/$$_ribbon.r3d $TMPDIR/$$_example8.r3d