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RID=1108699388-15307-155416144800.BLASTQ2, REC05270|O07943 BLASTP 2.2.10 [Oct-19-2004] 

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


RID: 1108699388-15307-155416144800.BLASTQ2


Query= REC05270|O07943
         (112 letters)



Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples 
           2,329,789 sequences; 790,010,076 total letters


 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports





                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||A64976  galactitol utilization operon repressor - Esche...   220   7e-57
ref|NP_707976.1|  galactitol utilization operon repressor [S...   197   5e-50
ref|NP_837700.1|  galactitol utilization operon repressor [S...   197   5e-50
ref|NP_754503.1|  hypothetical protein c2615 [Escherichia co...   197   5e-50
dbj|BAB36316.1|  split galactitol utilization operon repress...   197   5e-50
sp|P36930|GATR_ECOLI  Galactitol utilization operon repressor     197   5e-50
gb|AAO64739.1|  GatR2 [Escherichia coli]                          190   1e-47
emb|CAA56232.1|  repressor of gat operon [Escherichia coli]       132   2e-30
prf||2113201G  carbohydrate phosphotransferase II                 130   1e-29
ref|YP_152272.1|  galactitol utilization operon repressor [S...   129   2e-29
gb|AAL22134.1|  transcriptional regulator of sugar metabolis...   129   2e-29
gb|AAL60174.1|  GatR [Klebsiella oxytoca]                         127   8e-29
ref|ZP_00132352.2|  COG1349: Transcriptional regulators of s...    91   6e-18
ref|NP_708928.1|  putative DEOR-type transcriptional regulat...    70   2e-11
ref|NP_755753.1|  Putative aga operon transcriptional repres...    70   2e-11
ref|YP_074622.1|  DeoR-family transcriptional regulator [Sym...    68   6e-11
dbj|BAB58358.1|  lactose phosphotransferase system repressor...    67   1e-10
emb|CAG43905.1|  lactose phosphotransferase system repressor...    67   1e-10
ref|YP_041640.1|  lactose phosphotransferase system represso...    67   1e-10
ref|NP_691419.1|  transcriptional regulator [Oceanobacillus ...    66   2e-10
ref|NP_814469.1|  transcriptional regulator, DeoR family [En...    65   6e-10
ref|NP_765343.1|  lactose phosphotransferase system represso...    64   8e-10
ref|YP_131813.1|  putative DeoR-family regulatory protein [P...    64   8e-10
ref|YP_080651.1|  probable transcriptional regulator YulB [B...    64   8e-10
gb|AAP96422.1|  glycerol-3-phosphate regulon repressor [Haem...    64   8e-10
dbj|BAB99324.1|  Transcriptional regulators of sugar metabol...    63   2e-09
dbj|BAC18634.1|  putative deoR-family transcriptional regula...    63   2e-09
ref|NP_107585.1|  transcriptional regulator [Mesorhizobium l...    62   3e-09
ref|ZP_00336606.1|  COG1349: Transcriptional regulators of s...    62   3e-09
ref|YP_071580.1|  DeoR-family regulatory protein [Yersinia p...    62   4e-09
ref|NP_939779.1|  Putative sugar related operon transcriptio...    62   4e-09
ref|ZP_00204470.1|  COG1349: Transcriptional regulators of s...    62   5e-09
ref|NP_390999.1|  hypothetical protein BSU31210 [Bacillus su...    61   7e-09
pir||B43258  regulatory protein lacR - Streptococcus mutans ...    61   9e-09
ref|NP_607753.1|  putative lactose phosphotransferase system...    61   9e-09
ref|NP_801640.1|  putative lactose phosphotransferase system...    61   9e-09
ref|NP_721845.1|  lactose repressor [Streptococcus mutans UA...    61   9e-09
ref|ZP_00286189.1|  COG1349: Transcriptional regulators of s...    60   1e-08
ref|ZP_00333242.1|  COG1349: Transcriptional regulators of s...    60   1e-08
ref|NP_624108.1|  Transcriptional regulator of sugar metabol...    60   1e-08
ref|NP_799813.1|  putative regulatory protein [Vibrio paraha...    60   1e-08
ref|YP_206964.1|  transcriptional regulator, GlpR family [Vi...    60   1e-08
ref|ZP_00286100.1|  COG1349: Transcriptional regulators of s...    60   2e-08
dbj|BAC71050.1|  putative DeoR-family transcriptional regula...    60   2e-08
ref|YP_131658.1|  Putative transcriptional regulator, DeoR f...    59   3e-08
gb|AAO59009.1|  transcriptional regulator, DeoR family [Pseu...    59   3e-08
ref|YP_061707.1|  transcriptional regulator, DeoR family [Le...    59   3e-08
emb|CAD30910.1|  putative deoR-family transcriptional regula...    59   3e-08
gb|AAF93659.1|  transcriptional regulator, DeoR family [Vibr...    59   4e-08
ref|NP_386333.1|  PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [...    59   4e-08
ref|NP_051611.1|  glycerol-3-phosphate regulon repressor [De...    59   4e-08
ref|ZP_00133471.1|  COG1349: Transcriptional regulators of s...    59   5e-08
ref|NP_928175.1|  Putative aga operon transcriptional repres...    58   6e-08
ref|NP_349557.1|  Lactose phosphotransferase system represso...    58   6e-08
ref|ZP_00269479.1|  COG1349: Transcriptional regulators of s...    58   8e-08
ref|ZP_00047886.2|  COG1349: Transcriptional regulators of s...    58   8e-08
ref|NP_747510.1|  transcriptional regulator, DeoR family [Ps...    58   8e-08
ref|ZP_00124670.1|  COG1349: Transcriptional regulators of s...    58   8e-08
ref|ZP_00265059.1|  COG1349: Transcriptional regulators of s...    57   1e-07
ref|YP_177106.1|  transcriptional regulator of sugar metabol...    57   1e-07
ref|ZP_00007156.1|  COG1349: Transcriptional regulators of s...    57   1e-07
ref|YP_020484.1|  transcriptional regulator, deor family [Ba...    57   1e-07
ref|YP_152946.1|  putative DeoR-family transcriptional regul...    57   1e-07
ref|NP_469715.1|  hypothetical protein lin0370 [Listeria inn...    57   1e-07
ref|NP_463882.1|  hypothetical protein lmo0352 [Listeria mon...    57   1e-07
ref|NP_736357.1|  hypothetical protein gbs1923 [Streptococcu...    57   1e-07
ref|YP_085060.1|  transcriptional regulator, DeoR family [Ba...    57   1e-07
ref|YP_012981.1|  transcriptional regulator, DeoR family [Li...    57   1e-07
emb|CAB46398.1|  putative transcriptional regulator [Strepto...    57   1e-07
ref|NP_832522.1|  Transcriptional regulator, DeoR family [Ba...    57   2e-07
ref|NP_759628.1|  Transcriptional regulator of sugar metabol...    57   2e-07
ref|NP_807239.1|  putative DeoR-family transcriptional regul...    57   2e-07
ref|NP_389321.1|  transcriptional regulator (DeoR family) [B...    57   2e-07
ref|NP_756679.1|  Hypothetical transcriptional regulator yih...    57   2e-07
ref|NP_541404.1|  TRANSCRIPTIONAL REGULATOR, DEOR FAMILY [Br...    57   2e-07
gb|AAN34041.1|  transcriptional regulator, DeoR family [Bruc...    57   2e-07
ref|ZP_00132400.2|  COG1349: Transcriptional regulators of s...    57   2e-07
ref|NP_438777.1|  glycerol-3-phosphate regulon repressor [Ha...    56   2e-07
gb|AAO56674.1|  transcriptional regulator, DeoR family [Pseu...    56   2e-07
ref|NP_933294.1|  transcriptional regulator of sugar metabol...    56   2e-07
ref|NP_607978.1|  putative lactose phosphotransferase system...    56   2e-07
ref|ZP_00365838.1|  COG1349: Transcriptional regulators of s...    56   2e-07
ref|NP_802920.1|  putative lactose phosphotransferase system...    56   2e-07
ref|YP_060966.1|  Lactose phosphotransferase system represso...    56   2e-07
gb|AAG04879.1|  probable transcriptional regulator [Pseudomo...    56   2e-07
ref|ZP_00123417.1|  COG1349: Transcriptional regulators of s...    56   2e-07
ref|NP_885275.1|  glycerol-3-phosphate regulon repressor pro...    56   3e-07
ref|NP_881259.1|  glycerol-3-phosphate regulon repressor pro...    56   3e-07
ref|NP_889595.1|  glycerol-3-phosphate regulon repressor pro...    56   3e-07
ref|YP_087379.1|  GlpR protein [Mannheimia succiniciproducen...    56   3e-07
emb|CAB96011.1|  putative transcriptional regulatory protein...    56   3e-07
ref|ZP_00123001.2|  COG1349: Transcriptional regulators of s...    56   3e-07
gb|AAQ87128.1|  Transcriptional repressor [Rhizobium sp. NGR...    56   3e-07
ref|NP_833445.1|  Fructose repressor [Bacillus cereus ATCC 1...    55   4e-07
ref|NP_720258.1|  transcriptional regulator, DeoR family [Sh...    55   4e-07
ref|NP_709684.2|  putative DEOR-type transcriptional regulat...    55   4e-07
ref|NP_471761.1|  hypothetical protein lin2431 [Listeria inn...    55   4e-07
ref|NP_979102.1|  transcriptional regulator, DeoR family [Ba...    55   4e-07
ref|ZP_00205356.1|  COG1349: Transcriptional regulators of s...    55   4e-07
dbj|BAC19646.1|  putative transcription regulator [Corynebac...    55   4e-07




Alignments


>pir||A64976 galactitol utilization operon repressor - Escherichia coli  (strain
           K-12)
 dbj|BAA15953.1| Galactitol utilization operon repressor (fragment). [Escherichia
           coli]
 dbj|BAA15942.1| Galactitol utilization operon repressor (fragment). [Escherichia
           coli]
          Length = 112

 Score =  220 bits (561), Expect = 7e-57
 Identities = 112/112 (100%), Positives = 112/112 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTDPTHVIWTQA 112
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTDPTHVIWTQA
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTDPTHVIWTQA 112





>ref|NP_707976.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
           301]
 gb|AAN43683.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
           301]
          Length = 259

 Score =  197 bits (502), Expect = 5e-50
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102





>ref|NP_837700.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
           2457T]
 gb|AAP17509.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
           2457T]
          Length = 259

 Score =  197 bits (502), Expect = 5e-50
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102





>ref|NP_754503.1| hypothetical protein c2615 [Escherichia coli CFT073]
 gb|AAN81071.1| Hypothetical protein [Escherichia coli CFT073]
          Length = 259

 Score =  197 bits (502), Expect = 5e-50
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102





>dbj|BAB36316.1| split galactitol utilization operon repressor [Escherichia coli
           O157:H7]
 pir||E90990 split galactitol utilization operon repressor [imported] -
           Escherichia coli (strain O157:H7, substrain RIMD
           0509952)
 ref|NP_310920.1| split galactitol utilization operon repressor [Escherichia coli
           O157:H7]
          Length = 259

 Score =  197 bits (502), Expect = 5e-50
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102





>sp|P36930|GATR_ECOLI Galactitol utilization operon repressor
          Length = 259

 Score =  197 bits (502), Expect = 5e-50
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102





>gb|AAO64739.1| GatR2 [Escherichia coli]
          Length = 256

 Score =  190 bits (482), Expect = 1e-47
 Identities = 98/99 (98%), Positives = 99/99 (100%)

Query: 4   NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
           NSFERR+KIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS
Sbjct: 1   NSFERRDKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 60

Query: 64  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
Sbjct: 61  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 99





>emb|CAA56232.1| repressor of gat operon [Escherichia coli]
          Length = 68

 Score =  132 bits (333), Expect = 2e-30
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
          MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1  MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61 IMSGNSET 68
          IMSGNSET
Sbjct: 61 IMSGNSET 68





>prf||2113201G carbohydrate phosphotransferase II
          Length = 68

 Score =  130 bits (327), Expect = 1e-29
 Identities = 67/68 (98%), Positives = 67/68 (98%)

Query: 1  MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
          MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
Sbjct: 1  MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60

Query: 61 IMSGNSET 68
          IMSG SET
Sbjct: 61 IMSGKSET 68





>ref|YP_152272.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
 gb|AAV78960.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
 ref|NP_806860.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 ref|NP_457646.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gb|AAO70720.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 emb|CAD07784.1| galactitol utilization operon repressor [Salmonella enterica subsp.
           enterica serovar Typhi]
 pir||AB0899 galactitol utilization operon repressor [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
          Length = 257

 Score =  129 bits (325), Expect = 2e-29
 Identities = 66/100 (66%), Positives = 78/100 (78%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MNSFERRNKI+ L+N QG+VLV DL+  F  SE TIRADLR LE+KG+VTRFHGGAAK  
Sbjct: 1   MNSFERRNKIVDLINTQGSVLVMDLSNTFGISEVTIRADLRLLEEKGLVTRFHGGAAKPG 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S  +E + QEV  ++R+QLAS PK RIAQAA  M+ EGMT
Sbjct: 61  SHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVEEGMT 100





>gb|AAL22134.1| transcriptional regulator of sugar metabolism [Salmonella
           typhimurium LT2]
 ref|NP_462175.1| galactitol utilization operon transcriptional repressor [Salmonella
           typhimurium LT2]
          Length = 257

 Score =  129 bits (325), Expect = 2e-29
 Identities = 66/100 (66%), Positives = 78/100 (78%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MNSFERRNKI+ L+N QG+VLV DL+  F  SE TIRADLR LE+KG+VTRFHGGAAK  
Sbjct: 1   MNSFERRNKIVDLINTQGSVLVMDLSNTFGISEVTIRADLRLLEEKGLVTRFHGGAAKPG 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S  +E + QEV  ++R+QLAS PK RIAQAA  M+ EGMT
Sbjct: 61  SHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVEEGMT 100





>gb|AAL60174.1| GatR [Klebsiella oxytoca]
          Length = 257

 Score =  127 bits (319), Expect = 8e-29
 Identities = 65/100 (65%), Positives = 80/100 (80%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MNSFERRNKI+++VN QG+VLV DL+ +F  SE TIRADLR LE+KG++TRFHGGAA+  
Sbjct: 1   MNSFERRNKIVEMVNAQGSVLVLDLSNLFGISEVTIRADLRLLEEKGLLTRFHGGAARPG 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S  +E +  EV  ++R+QLAS PK RIAQAAV MI EGMT
Sbjct: 61  SNLTEGDNLEVVLEDRYQLASDPKKRIAQAAVAMISEGMT 100





>ref|ZP_00132352.2| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 2336]
 ref|ZP_00122446.1| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 129PT]
          Length = 276

 Score = 91.3 bits (225), Expect = 6e-18
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 6/106 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAA--- 59
           MN+FERR++II+L+ E G V V DLA  F  SE ++R DLR LE++G++TRFHGGAA   
Sbjct: 14  MNTFERRHQIIELLKENGIVSVNDLAKRFNVSEVSVRTDLRMLEEQGILTRFHGGAAFSN 73

Query: 60  ---KIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              K        E++E   +ER  L+  PK+ IA+ A +++ EG T
Sbjct: 74  SNEKPYEKKERNESKETSLEERHGLSHDPKSHIARIAAQLVKEGDT 119





>ref|NP_708928.1| putative DEOR-type transcriptional regulator of aga operon
           [Shigella flexneri 2a str. 301]
 gb|AAN44635.1| putative DEOR-type transcriptional regulator of aga operon
           [Shigella flexneri 2a str. 301]
 ref|NP_838639.1| putative DEOR-type transcriptional regulator of aga operon
           [Shigella flexneri 2a str. 2457T]
 gb|AAP18450.1| putative DEOR-type transcriptional regulator of aga operon
           [Shigella flexneri 2a str. 2457T]
          Length = 274

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR +IIQ + +QG+V V DL+ ++  S  TIR DL FLE++G+  R +GGA   +  +S
Sbjct: 17  ERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGA---LICDS 73

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
            T + E   +++  L +A K  +A+AAV++I  G
Sbjct: 74  TTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPG 107





>ref|NP_755753.1| Putative aga operon transcriptional repressor [Escherichia coli
           CFT073]
 gb|AAN82327.1| Putative aga operon transcriptional repressor [Escherichia coli
           CFT073]
 gb|AAC76165.1| putative DEOR-type transcriptional regulator of aga operon;
           transcriptional repressor of N-acetyl galactosamine
           metabolism (DeoR family) [Escherichia coli K12]
 gb|AAA57934.1| ORF_f269 [Escherichia coli]
 gb|AAG58261.1| putative DEOR-type transcriptional regulator of aga operon
           [Escherichia coli O157:H7 EDL933]
 pir||G65102 probable transcription repressor of aga operon - Escherichia coli
           (strain K-12)
 dbj|BAB37432.1| transcriptional repressor of aga operon [Escherichia coli O157:H7]
 ref|NP_312036.1| transcriptional repressor of aga operon [Escherichia coli O157:H7]
 ref|NP_417600.1| putative DEOR-type transcriptional regulator of aga operon
           [Escherichia coli K12]
 pir||A85975 robable transcription repressor of aga operon [similarity] -
           Escherichia coli (strain O157:H7, substrain EDL933)
 pir||A91130 transcription repressor of aga operon [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 ref|NP_289702.1| putative DEOR-type transcriptional regulator of aga operon
           [Escherichia coli O157:H7 EDL933]
 sp|P42902|AGAR_ECOLI Putative aga operon transcriptional repressor
 gb|AAF81081.1| AgaR [Escherichia coli]
          Length = 269

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR +IIQ + +QG+V V DL+ ++  S  TIR DL FLE++G+  R +GGA   +  +S
Sbjct: 17  ERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGA---LICDS 73

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
            T + E   +++  L +A K  +A+AAV++I  G
Sbjct: 74  TTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPG 107





>ref|YP_074622.1| DeoR-family transcriptional regulator [Symbiobacterium thermophilum
           IAM 14863]
 dbj|BAD39778.1| DeoR-family transcriptional regulator [Symbiobacterium thermophilum
           IAM 14863]
          Length = 260

 Score = 68.2 bits (165), Expect = 6e-11
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER+ +II+ V     V VQDLA VF  SE+TIR DLR LE++G++ R HGGA       +
Sbjct: 11  ERKRRIIERVRSGAAVTVQDLAQVFGVSESTIRRDLRELEREGLLERTHGGAVP-----A 65

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           +    E  + E+     A K  IA+ A  M+H+G
Sbjct: 66  DPTLTEPSYAEKTDQNRAEKMAIARVAAGMVHDG 99





>dbj|BAB58358.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus Mu50]
 ref|NP_375309.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus N315]
 dbj|BAB43288.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus N315]
 sp|P67744|LACR_STAAN Lactose phosphotransferase system repressor
 sp|P67743|LACR_STAAM Lactose phosphotransferase system repressor
 pir||G90015 lactose phosphotransferase system repressor [imported] -
           Staphylococcus aureus (strain N315)
 ref|NP_372720.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus Mu50]
          Length = 251

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MN  ER ++I +LVN++GT+   ++      S+ T+R DL  LE KG++T+ HGGA    
Sbjct: 1   MNKHERLDEIAKLVNKKGTIRTNEIVEGLNVSDMTVRRDLIELENKGILTKIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             NS  + +E+  KE+     A K  IA+ A  +I +G T
Sbjct: 57  RSNSTFQYKEISHKEKHTRQIAEKRYIARKAASLIEDGDT 96





>emb|CAG43905.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MSSA476]
 ref|YP_186999.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus COL]
 gb|AAW37064.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus COL]
 dbj|BAB95987.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MW2]
 ref|YP_044206.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MSSA476]
 ref|NP_646939.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MW2]
 sp|P0A0Q0|LACR_STAAU Lactose phosphotransferase system repressor
 sp|P0A0P9|LACR_STAAW Lactose phosphotransferase system repressor
 pir||A44506 lactose operon repressor lacR - Staphylococcus aureus
 sp|Q6G7B8|LACR_STAAS Lactose phosphotransferase system repressor
 gb|AAA67854.1| lacR repressor
          Length = 251

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MN  ER ++I +LVN++GT+   ++      S+ T+R DL  LE KG++T+ HGGA    
Sbjct: 1   MNKHERLDEIAKLVNKKGTIRTNEIVEGLNVSDMTVRRDLIELENKGILTKIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             NS  + +E+  KE+     A K  IA+ A  +I +G T
Sbjct: 57  RSNSTFQYKEISHKEKHTRQIAEKRFIAKKAASLIEDGDT 96





>ref|YP_041640.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MRSA252]
 emb|CAG41265.1| lactose phosphotransferase system repressor [Staphylococcus aureus
           subsp. aureus MRSA252]
 sp|Q6GEN3|LACR_STAAR Lactose phosphotransferase system repressor
          Length = 251

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MN  ER ++I +LVN++GT+   ++      S+ T+R DL  LE KG++T+ HGGA    
Sbjct: 1   MNKHERLDEIAKLVNKKGTIRTNEIVEGLNVSDMTVRRDLIELENKGILTKIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             NS  + +E+  KE+     A K  IA+ A  +I +G T
Sbjct: 57  RSNSTFQYKEISHKEKHTRQIAEKRFIARKAASLIEDGDT 96





>ref|NP_691419.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
 dbj|BAC12454.1| transcriptional regulator (DeoR family) [Oceanobacillus iheyensis
           HTE831]
          Length = 257

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 7/109 (6%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER +KI++LVNE+ ++ V D++ +FA +E TIR DL  LE++  + R HGGA  +   +S
Sbjct: 5   ERHHKIVELVNEKKSIRVSDMSKLFAVTEETIRRDLEKLEKENKLARSHGGAVSLHPNDS 64

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG---MTDPTHVIWTQA 112
                E+ + +R  +    K +IA  A+K + EG   + D +   W  A
Sbjct: 65  ----LEIPYTQREIMNVREKQKIAMEAIKHVFEGDKIILDASTTAWYMA 109





>ref|NP_814469.1| transcriptional regulator, DeoR family [Enterococcus faecalis V583]
 gb|AAO80539.1| transcriptional regulator, DeoR family [Enterococcus faecalis V583]
          Length = 250

 Score = 64.7 bits (156), Expect = 6e-10
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER  KI+QL++++  V  Q+LA +F ASE+TIR DL+ LE   ++ R HGGA +I++   
Sbjct: 5   ERHQKILQLLDQKSVVKSQELASLFNASESTIRRDLQELEDANLLERIHGGAKRILNLGF 64

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           E    E   K   +     K +IA  AV  + +G
Sbjct: 65  EQNMTEKSIKNTHE-----KQKIASLAVSCVQDG 93





>ref|NP_765343.1| lactose phosphotransferase system repressor [Staphylococcus
           epidermidis ATCC 12228]
 gb|AAO05429.1| lactose phosphotransferase system repressor [Staphylococcus
           epidermidis ATCC 12228]
 ref|YP_189359.1| lactose phosphotransferase system repressor [Staphylococcus
           epidermidis RP62A]
 gb|AAW55181.1| lactose phosphotransferase system repressor [Staphylococcus
           epidermidis RP62A]
          Length = 251

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MN ++R ++I +LVN++G+V   ++      S+ T+R DL  LE+KGV+T+ HGGA    
Sbjct: 1   MNKYDRLDEITKLVNKRGSVRTNEIVEDLNVSDMTVRRDLAELEEKGVLTKIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             NS  + +E+  +E+       K  IA+ AV +I +G T
Sbjct: 57  RSNSAFQYKEMSHQEKHTRFIEEKRFIAKNAVDLIEDGDT 96





>ref|YP_131813.1| putative DeoR-family regulatory protein [Photobacterium profundum
           SS9]
 emb|CAG22013.1| putative DeoR-family regulatory protein [Photobacterium profundum]
          Length = 258

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 5/99 (5%)

Query: 4   NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
           ++ ERR +I+ LVN  G   V+DLA  F  S  TIR+DL FLE+ G V R HG A     
Sbjct: 3   SAVERRMEIVSLVNRDGKARVEDLAAQFNVSSVTIRSDLSFLEKNGYVVRSHGAAIP--- 59

Query: 64  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
            NS    +    ++R Q A   K+ I QAA K+I  G T
Sbjct: 60  -NSGVIAELTVHEKRRQNAGI-KSLIGQAAAKLIESGDT 96





>ref|YP_080651.1| probable transcriptional regulator YulB [Bacillus licheniformis
           ATCC 14580]
 gb|AAU25013.1| probable transcriptional regulator YulB [Bacillus licheniformis
           ATCC 14580]
 ref|YP_093076.1| YulB [Bacillus licheniformis ATCC 14580]
 gb|AAU42383.1| YulB [Bacillus licheniformis DSM 13]
          Length = 253

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 8/109 (7%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER  KI++LVN + +V V +L+ +F+ +E TIR DL  LE++  + R HGGA  +     
Sbjct: 5   ERHQKIVELVNLRSSVRVTELSELFSVTEETIRRDLEKLEKENKLKRSHGGAVSV----- 59

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG---MTDPTHVIWTQA 112
           +TE +EV F+ER       K  IA  AVK +  G   + D +   W  A
Sbjct: 60  QTEEREVHFREREITNVNEKKMIAFEAVKHVKSGERIILDASTTAWYMA 108





>gb|AAP96422.1| glycerol-3-phosphate regulon repressor [Haemophilus ducreyi
           35000HP]
 ref|NP_874033.1| glycerol-3-phosphate regulon repressor [Haemophilus ducreyi
           35000HP]
          Length = 253

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R NKII+LVN+ G V  ++L    A S  TIR DL  L +K ++ R HGGA   M  N+E
Sbjct: 6   RHNKIIELVNQLGYVSTEELVAQLAVSSQTIRRDLNELAEKNLLRRHHGGAG--MPSNNE 63

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
                  + ER +  SA KN IAQ   +MI  G
Sbjct: 64  NS----DYSERKKFFSAQKNIIAQQVAEMIPNG 92





>dbj|BAB99324.1| Transcriptional regulators of sugar metabolism [Corynebacterium
          glutamicum ATCC 13032]
 ref|NP_601137.1| transcriptional regulator of sugar metabolism [Corynebacterium
          glutamicum ATCC 13032]
 emb|CAF20272.1| transcriptional regulators of sugar metabolism, DeoR family
          [Corynebacterium glutamicum ATCC 13032]
          Length = 259

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M + ERR +I  L   +G V V +LAG F  +  TIR DL  L+++G+V R HGGA    
Sbjct: 1  MYAEERRRQIASLTAVEGRVNVTELAGRFDVTAETIRRDLAVLDREGIVHRVHGGAVATQ 60

Query: 63 SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMI 97
          S     +T E+    RF+ AS+ K  IA+AA++ +
Sbjct: 61 S----FQTTELSLDTRFRSASSAKYSIAKAAMQFL 91





>dbj|BAC18634.1| putative deoR-family transcriptional regulator [Corynebacterium
          efficiens YS-314]
 ref|NP_738434.1| putative deoR-family transcriptional regulator [Corynebacterium
          efficiens YS-314]
          Length = 259

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M + ERR +I  L   +G V V +LAG F  +  TIR DL  L+++G+V R HGGA    
Sbjct: 1  MYAEERRRQIASLTAVEGRVNVTELAGRFDVTAETIRRDLAVLDREGIVHRVHGGAVATQ 60

Query: 63 SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMI 97
          S     +T E+    RF+ AS+ K  IA+AA++ +
Sbjct: 61 S----FQTTELSLDTRFRSASSAKYSIAKAAMQFL 91





>ref|NP_107585.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
 dbj|BAB53371.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
          Length = 253

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M S +RR  I+  V   G V ++DL+  F  SE T+R+DL  L++KG++T+  GGA    
Sbjct: 1   MLSEQRRQSILGEVQRSGQVRIKDLSDNFGVSEVTVRSDLEILDRKGLLTKTRGGAV--- 57

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
                T++    F  R Q     K RIA+AAV++  +  +
Sbjct: 58  --TRTTDSTTAAFARRMQTNLDAKKRIARAAVELFEDNQS 95





>ref|ZP_00336606.1| COG1349: Transcriptional regulators of sugar metabolism
          [Silicibacter sp. TM1040]
          Length = 264

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 6/97 (6%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M++ +R+N+I+ L+ +Q  V V+DLA  F  S  T+R DLR L  +G ++R HGGA +I 
Sbjct: 1  MDANDRQNEILSLLTQQDRVEVEDLAQRFGVSLQTVRTDLRDLSARGQLSRVHGGAMRIS 60

Query: 63 SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
          S ++       G+ ER  L +  K  +A  A ++I E
Sbjct: 61 SASNR------GYAERRSLNATGKRAMAALAAEVIPE 91





>ref|YP_071580.1| DeoR-family regulatory protein [Yersinia pseudotuberculosis IP
           32953]
 ref|NP_994803.1| DeoR-family regulatory protein [Yersinia pestis biovar Medievalis
           str. 91001]
 ref|NP_404452.1| DeoR-family regulatory protein [Yersinia pestis CO92]
 ref|NP_670515.1| putative DEOR-type transcriptional regulator of aga operon
           [Yersinia pestis KIM]
 gb|AAS63680.1| DeoR-family regulatory protein [Yersinia pestis biovar Medievalis
           str. 91001]
 gb|AAM86766.1| putative DEOR-type transcriptional regulator of aga operon
           [Yersinia pestis KIM]
 emb|CAC89678.1| DeoR-family regulatory protein [Yersinia pestis CO92]
 emb|CAH22313.1| DeoR-family regulatory protein [Yersinia pseudotuberculosis IP
           32953]
 pir||AC0102 DeoR-family regulatory protein YPO0831 [imported] - Yersinia pestis
           (strain CO92)
          Length = 258

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 5   SFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSG 64
           + ERR +I  +V +QG   V+DLA  F  S  TIR+DL FLE+ G + R HG A      
Sbjct: 4   AIERRMEIFNIVTQQGKARVEDLAERFNVSSVTIRSDLSFLEKNGYIVRSHGSAIP---- 59

Query: 65  NSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
            +     E+   E+ +  S  K+ I QAA K+I+ G T
Sbjct: 60  -NTGVIAELTVHEKRRRNSGVKSLIGQAAAKLINSGDT 96





>ref|NP_939779.1| Putative sugar related operon transcriptional regulator (PTS
          system) [Corynebacterium diphtheriae NCTC 13129]
 emb|CAE49958.1| Putative sugar related operon transcriptional regulator (PTS
          system) [Corynebacterium diphtheriae]
          Length = 258

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M S ERR +I  L   +G V V +LA  F  +  TIR DL  L+++GVV R HGGA    
Sbjct: 1  MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDREGVVHRVHGGAV--- 57

Query: 63 SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
            N   +T E     R + AS  KN IA AA+  + E
Sbjct: 58 -ANQTFQTAEFSLDTRSRSASGAKNSIAHAALSYLPE 93





>ref|ZP_00204470.1| COG1349: Transcriptional regulators of sugar metabolism
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 253

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 39/93 (41%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R NKII+LVN+ G V  ++L      S  TIR DL  L +K ++ R HGGA   M  NSE
Sbjct: 6   RHNKIIELVNQLGYVSTEELVAQLDVSSQTIRRDLNELAEKNLIRRHHGGAG--MPSNSE 63

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
                  + ER Q  S  KN IA+    MI  G
Sbjct: 64  NS----DYTERKQFFSEQKNEIARHVAAMIPNG 92





>ref|NP_390999.1| hypothetical protein BSU31210 [Bacillus subtilis subsp. subtilis
           str. 168]
 emb|CAB07948.1| unknown [Bacillus subtilis]
 emb|CAB15099.1| yulB [Bacillus subtilis subsp. subtilis str. 168]
 pir||D70014 transcription regulator DeoR family homolog yulB - Bacillus
           subtilis
 sp|O05261|YULB_BACSU Putative HTH-type transcriptional regulator yulB
          Length = 258

 Score = 61.2 bits (147), Expect = 7e-09
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER+ KI+++VN + ++ V +L+ +F+ +E TIR DL  LE++  ++R HGGA  I    S
Sbjct: 5   ERQQKIVEIVNMRSSIRVSELSDIFSVTEETIRRDLEKLEKEHKLSRSHGGAVSIQQKES 64

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG---MTDPTHVIWTQA 112
                E+ F ER       K  IA  A K +  G   + D +   W  A
Sbjct: 65  -----EIHFSEREITNVIEKKAIAHEAAKYVKSGDRIILDASTTAWYMA 108





>pir||B43258 regulatory protein lacR - Streptococcus mutans
 gb|AAA26903.1| lactose repressor
          Length = 251

 Score = 60.8 bits (146), Expect = 9e-09
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  +I +L+N++GT+ V ++      S+ T+R DL  LE  GV+TR HGGA    
Sbjct: 1   MKKEERLEEITKLINKRGTIRVTEVVERLKVSDMTVRRDLTELEGLGVLTRIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             N+  + +E+  +E+       K+ IAQ A +++ EG T
Sbjct: 57  RSNNIFQYKEMSHEEKHSRQIEEKHYIAQKAAELVEEGDT 96





>ref|NP_607753.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS8232]
 ref|YP_060769.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
           MGAS10394]
 gb|AAT87586.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
           MGAS10394]
 gb|AAL98252.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS8232]
 gb|AAK34460.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes M1 GAS]
 ref|NP_269739.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes M1 GAS]
          Length = 256

 Score = 60.8 bits (146), Expect = 9e-09
 Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGN- 65
           ER  KI ++VNEQG V V D+      S+ T+R DL  LE+ G + R HGGA  I   N 
Sbjct: 5   ERLLKITEIVNEQGIVTVNDIIQTLNVSDMTVRRDLDELEKAGKLIRIHGGAQSITMPNK 64

Query: 66  ---SETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              S  E Q V  KE+++LAS     +       I  G T
Sbjct: 65  KERSNIEKQTVQTKEKWELASYATQLVNDGETIFIGPGTT 104





>ref|NP_801640.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes SSI-1]
 ref|NP_665293.1| putative phosphotransferase system repressor protein [Streptococcus
           pyogenes MGAS315]
 gb|AAM80096.1| putative phosphotransferase system repressor protein [Streptococcus
           pyogenes MGAS315]
 dbj|BAC63473.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes SSI-1]
          Length = 256

 Score = 60.8 bits (146), Expect = 9e-09
 Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGN- 65
           ER  KI ++VNEQG V V D+      S+ T+R DL  LE+ G + R HGGA  I   N 
Sbjct: 5   ERLLKITEIVNEQGIVTVNDIIQTLNVSDMTVRRDLDELEKAGKLIRIHGGAQSITMPNK 64

Query: 66  ---SETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              S  E Q V  KE+++LAS     +       I  G T
Sbjct: 65  KERSNIEKQTVQTKEKWELASYATQLVNDGETIFIGPGTT 104





>ref|NP_721845.1| lactose repressor [Streptococcus mutans UA159]
 gb|AAN59151.1| lactose repressor [Streptococcus mutans UA159]
 sp|P26422|LACR_STRMU Lactose phosphotransferase system repressor
          Length = 251

 Score = 60.8 bits (146), Expect = 9e-09
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  +I +L+N++GT+ V ++      S+ T+R DL  LE  GV+TR HGGA    
Sbjct: 1   MRKEERLEEITKLINKRGTIRVTEVVERLKVSDMTVRRDLTELEGLGVLTRIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             N+  + +E+  +E+       K+ IAQ A +++ EG T
Sbjct: 57  RSNNIFQYKEMSHEEKHSRQIEEKHYIAQKAAELVEEGDT 96





>ref|ZP_00286189.1| COG1349: Transcriptional regulators of sugar metabolism
           [Enterococcus faecium]
          Length = 267

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR KI+ L+ +Q  V  QDL  +  ASE+TIR DL+ LE  G + R HGGA K    N 
Sbjct: 22  ERRQKILDLLEQQKIVKSQDLVNLLNASESTIRRDLQELENSGFLERVHGGAKKEQLLNF 81

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
           E    E   K   +     K +IA++A + I++
Sbjct: 82  EQNMSEKSLKNVHE-----KQQIAKSAAETIND 109





>ref|ZP_00333242.1| COG1349: Transcriptional regulators of sugar metabolism
           [Streptococcus suis 89/1591]
          Length = 255

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           MN  ER  +I +LVN++GTV + ++  +   ++ T+R D   LE++GV+T+ HGGA    
Sbjct: 1   MNKRERLEEITRLVNKKGTVRISEIVELLNVTDMTVRRDFIELEEQGVLTKIHGGA---- 56

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             N   + +E    E+       K  IA+ A ++I +G T
Sbjct: 57  RSNKAFQYREYSHSEKHIQNKEAKQEIAERAAQLIEDGDT 96





>ref|NP_624108.1| Transcriptional regulator of sugar metabolism [Thermoanaerobacter
           tengcongensis MB4]
 gb|AAM25712.1| Transcriptional regulator of sugar metabolism [Thermoanaerobacter
           tengcongensis MB4]
          Length = 268

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR KI +++++  ++ V +L+ +F  SE+TIR DL  LE+KG + R HGGA  + +G  
Sbjct: 5   ERRLKIAEIISKDKSISVSELSKLFNVSESTIRRDLHVLEEKGFIQRTHGGAI-LKTGTH 63

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
                E  F E+ ++    K +I + A  +I EG T
Sbjct: 64  ----YEPAFFEKEEVELEAKRKIGRIAASLIEEGDT 95





>ref|NP_799813.1| putative regulatory protein [Vibrio parahaemolyticus RIMD 2210633]
 dbj|BAC61646.1| putative regulatory protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 246

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R+N+I+QLVN++  V V +L+ +   S  TIR DL FLEQ+G + R HG A  + S + +
Sbjct: 4   RQNEILQLVNDRKRVQVTELSDIIGVSGVTIRQDLNFLEQQGYLKRVHGAATALQSDDID 63

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           T   EV F  +  LA+   + +A     +I  G
Sbjct: 64  TRL-EVRFDIKQTLANKAADLVAPNETVLIEGG 95





>ref|YP_206964.1| transcriptional regulator, GlpR family [Vibrio fischeri ES114]
 gb|AAW88076.1| transcriptional regulator, GlpR family [Vibrio fischeri ES114]
          Length = 258

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M++ ERR +I+ +VN+ G   V+DLA  F  S  TIR+DL FLE+ G V R HG A    
Sbjct: 2   MSAVERRMEIVNVVNQDGKARVEDLAARFDVSSVTIRSDLSFLEKNGYVVRSHGAAIPNT 61

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              +E    E    +R Q     K+ I  AA ++I  G T
Sbjct: 62  GVIAELTVHE----KRHQNIGT-KSSIGYAAAQLIENGDT 96





>ref|ZP_00286100.1| COG1349: Transcriptional regulators of sugar metabolism
           [Enterococcus faecium]
          Length = 261

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER   I+++VN++G + V ++      S+ T+R DL  LE+ G + R HGGA  +    S
Sbjct: 5   ERLLTIVEMVNKKGILTVNEIINQLDVSDMTVRRDLDELEKSGKLLRVHGGAQSL----S 60

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
            T  QE+   E+  L    K  IA  A  +IHEG T
Sbjct: 61  YTLDQELSHTEKATLQIQEKKEIAATAASLIHEGET 96





>dbj|BAC71050.1| putative DeoR-family transcriptional regulator [Streptomyces
           avermitilis MA-4680]
 ref|NP_824515.1| putative DeoR-family transcriptional regulator [Streptomyces
           avermitilis MA-4680]
          Length = 308

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 5/86 (5%)

Query: 15  LVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVG 74
           +V   G V +++LA V   SE T+R D+R LE +G++ R HGGA  ++ G     T+E G
Sbjct: 1   MVRANGAVSLRELARVVQTSEVTVRRDVRALEAEGLLDRRHGGA--VLPGGF---TRESG 55

Query: 75  FKERFQLASAPKNRIAQAAVKMIHEG 100
           F ++  LA+A K  IA  A  ++ EG
Sbjct: 56  FPQKSHLATAEKTAIADLAASLVEEG 81





>ref|YP_131658.1| Putative transcriptional regulator, DeoR family [Photobacterium
           profundum SS9]
 emb|CAG21856.1| Putative transcriptional regulator, DeoR family [Photobacterium
           profundum]
          Length = 263

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 37/99 (37%), Positives = 52/99 (52%)

Query: 4   NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
           N+ +RR+ I+ LVNE+G V V  LA  FA SE TIR DL  LE  G++ R +GGA  + S
Sbjct: 12  NTQQRRHTIVSLVNEKGEVSVDQLATFFATSEVTIRKDLTALETNGLLLRRYGGAVAMPS 71

Query: 64  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
                + ++     +  +A A   RI      +I  G T
Sbjct: 72  EIVSVDVEDNVSVRKLAIAKAAALRIRDHNRIIIDSGST 110





>gb|AAO59009.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
          tomato str. DC3000]
 ref|NP_795314.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
          tomato str. DC3000]
          Length = 255

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 9/96 (9%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+ +RR+ I+ L+NEQG V V DLA  F  SE TIR DL  LE  G++ R +GGA  +  
Sbjct: 5  NTPQRRHNILALLNEQGEVSVDDLARRFETSEVTIRKDLAALETNGLLLRRYGGAIPL-- 62

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                  E+   E  Q  S  K  IA+AAV  I E
Sbjct: 63 ------PHEL-ISESSQPVSRYKKAIARAAVSRIRE 91





>ref|YP_061707.1| transcriptional regulator, DeoR family [Leifsonia xyli subsp.
          xyli str. CTCB07]
 gb|AAT88602.1| transcriptional regulator, DeoR family [Leifsonia xyli subsp.
          xyli str. CTCB07]
          Length = 261

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M   ER+  I +++ E G V V DLA  FA +  T+R DLR LEQ G++ R HGGA    
Sbjct: 1  MYPLERQGLIERVLEEGGRVAVVDLAERFAVTTETVRRDLRVLEQAGILRRVHGGAV--- 57

Query: 63 SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMI 97
                 T EV   ER  L +A K  IA  A+ ++
Sbjct: 58 -ATERIGTAEVPVAERSGLRAATKQLIAARALDVL 91





>emb|CAD30910.1| putative deoR-family transcriptional regulator [Streptomyces
           coelicolor A3(2)]
 ref|NP_629073.1| putative deoR-family transcriptional regulator [Streptomyces
           coelicolor A3(2)]
          Length = 317

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 5/86 (5%)

Query: 15  LVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVG 74
           +V   G V +++LA V   SE T+R D+R LE +G++ R HGGA  ++ G     T+E G
Sbjct: 1   MVRANGAVSLRELARVVQTSEVTVRRDVRALEAEGLLDRRHGGA--VLPGGF---TRESG 55

Query: 75  FKERFQLASAPKNRIAQAAVKMIHEG 100
           F ++  LA+A K  IA  A  ++ EG
Sbjct: 56  FPQKSHLATAEKTAIADLAAGLVEEG 81





>gb|AAF93659.1| transcriptional regulator, DeoR family [Vibrio cholerae O1 biovar
          eltor str. N16961]
 ref|NP_230140.1| transcriptional regulator, DeoR family [Vibrio cholerae O1 biovar
          eltor str. N16961]
 pir||D82316 transcription regulator DeoR family VC0486 [imported] - Vibrio
          cholerae (strain N16961 serogroup O1)
          Length = 260

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+  RR+ I++LVNEQG V V+ L+  F  SE TIR DL  LE+ G + R +GGA  +  
Sbjct: 9  NTQLRRHTIVKLVNEQGEVSVEALSSQFETSEVTIRKDLASLEKNGQLLRRYGGAIAL-- 66

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                 +EV   E  +  S  K  +A+AA K+I +
Sbjct: 67 ------PKEVMHDELNEKVSVRKISLAKAAAKLIRD 96





>ref|NP_386333.1| PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Sinorhizobium meliloti
           1021]
 emb|CAC46806.1| PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Sinorhizobium meliloti]
          Length = 261

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   +RR  I+ ++ E GT  V++LA  F  S+ T+  DL  LEQ G++ + HGGA+   
Sbjct: 1   MKPEDRRQAIMDVLMEAGTASVEELALRFGVSKMTVHRDLDDLEQAGLLRKVHGGASIQS 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S   E++     F+ R ++A+  K R+AQ A  +I  G +
Sbjct: 61  SPQFESD-----FRYREKIATGEKRRLAQHAATLIEPGQS 95





>ref|NP_051611.1| glycerol-3-phosphate regulon repressor [Deinococcus radiodurans R1]
 gb|AAF12597.1|AE001826_66 glycerol-3-phosphate regulon repressor [Deinococcus radiodurans]
 pir||D75626 glycerol-3-phosphate regulon repressor - Deinococcus radiodurans
           (strain R1)
          Length = 272

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 33/96 (34%), Positives = 52/96 (54%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER  +I+QL+ E+GT+    L  +   S ATIR DL  L  +G++ + HGGAA       
Sbjct: 8   ERLTRIVQLLAERGTLRTAALTELLGVSSATIRRDLDVLAGRGLIRKLHGGAALAAPEPE 67

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
               Q+  +++R Q+    K R+A  A+++I  G T
Sbjct: 68  APLNQDQFYRDRQQVNHLGKQRLAGRALELIAPGQT 103





>ref|ZP_00133471.1| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 2336]
          Length = 260

 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query: 4   NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
           N+ +RR  I+QL+ ++G + V+ L   F  SE TIR DL  LE  G + R +GGA  I+ 
Sbjct: 9   NTEQRRQVIMQLLQDKGEISVEQLVQYFNTSEVTIRKDLSALESTGFLLRKYGGAVLILQ 68

Query: 64  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              E   +E+    +  +A A   RIA     +I  G T
Sbjct: 69  EPLEANHEELLSNRKLAIAKAAAERIADNNRIIIDSGST 107





>ref|NP_928175.1| Putative aga operon transcriptional repressor [Photorhabdus
           luminescens subsp. laumondii TTO1]
 emb|CAE13127.1| Putative aga operon transcriptional repressor [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 257

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 5/100 (5%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           M +++ +RR +II L+  +G+V V+ L+  F  S  TIR DLR+LEQKG   R +GGA  
Sbjct: 1   MAVDTVKRREQIIDLLCHEGSVRVEHLSTRFGVSSVTIRNDLRYLEQKGCALRSYGGAML 60

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
                 +   Q+ G     ++    K+RIA  A + + +G
Sbjct: 61  NQQFAFDRPLQDKG-----RINRDVKSRIAARAAQFVQDG 95





>ref|NP_349557.1| Lactose phosphotransferase system repressor lacR [Clostridium
          acetobutylicum ATCC 824]
 gb|AAK80897.1| Lactose phosphotransferase system repressor lacR [Clostridium
          acetobutylicum ATCC 824]
 pir||F97263 lactose phosphotransferase system repressor lacR [imported] -
          Clostridium acetobutylicum
          Length = 254

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 7  ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
          ER  +I++++     + + D+      +E T+R DL+ LE KG++ R +GGA K+ + N+
Sbjct: 5  ERFQRILEMLETNNIIKITDINEKLGVTEITVRRDLKVLENKGLIERIYGGAKKV-NANN 63

Query: 67 ETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
          + E +E+   E+ ++    K  IA+ A +MI E
Sbjct: 64 KVEFKELSNNEKRKINIEQKRHIAKLASEMIEE 96





>ref|ZP_00269479.1| COG1349: Transcriptional regulators of sugar metabolism
           [Rhodospirillum rubrum]
          Length = 285

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKI-MSGNS 66
           RR  + +++ E G   V DLA     SE TIR DL  +E+ G V R HGGA  + +    
Sbjct: 23  RRAAVQEVLQESGYATVADLARRLEVSEMTIRRDLSVMEEDGAVVRTHGGALSVSVEREG 82

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIH 98
             + +E  F++R +  +  K RIAQAA ++ +
Sbjct: 83  AFDREEPAFEQRRRQRADVKQRIAQAAARLAY 114





>ref|ZP_00047886.2| COG1349: Transcriptional regulators of sugar metabolism
           [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R  +I+  + + G V V  +A   A S+ TIR DL+ LE++G++ R HGGA         
Sbjct: 6   RHEEILSQLAQTGRVAVTGIAAALAVSDETIRRDLKMLEERGLLRRIHGGAV------LP 59

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              QE    ER QL S  K R+A  A  ++ +GM+
Sbjct: 60  RLDQERPLVERSQLNSREKGRVAALAEGLVEDGMS 94





>ref|NP_747510.1| transcriptional regulator, DeoR family [Pseudomonas putida
          KT2440]
 gb|AAN70974.1| transcriptional regulator, DeoR family [Pseudomonas putida
          KT2440]
          Length = 258

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 9/96 (9%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+ +RR+ I+ L++EQG V V  LA  FA SE TIR DL  LE  G++ R +GGA  +  
Sbjct: 5  NTPQRRHNILALLSEQGEVSVDALAKRFATSEVTIRKDLAALETNGLLLRRYGGAVPV-- 62

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                 QE+   E  Q  S+ K  IA+AAV  I E
Sbjct: 63 ------PQEL-LGEPAQPVSSYKKAIARAAVGRIRE 91





>ref|ZP_00124670.1| COG1349: Transcriptional regulators of sugar metabolism
          [Pseudomonas syringae pv. syringae B728a]
          Length = 255

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+ +RR+ I+ L+NEQG V V DLA  F  SE TIR DL  LE  G++ R +GGA  +  
Sbjct: 5  NTPQRRHNILALLNEQGEVSVDDLARRFETSEVTIRKDLAALETNGLLLRRYGGAVPLPH 64

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                +Q V         S  K  IA+AAV  I E
Sbjct: 65 ELISDGSQPV---------SRYKQAIARAAVCRIRE 91





>ref|ZP_00265059.1| COG1349: Transcriptional regulators of sugar metabolism
          [Pseudomonas fluorescens PfO-1]
          Length = 258

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 9/96 (9%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+ +RR+ I+ L+NEQG V V +LA  F  SE TIR DL  LE  G++ R +GGA     
Sbjct: 5  NTPQRRHNILALLNEQGEVSVDELAKRFETSEVTIRKDLAALEGHGLLLRRYGGAI---- 60

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
              T  QE+       + S  K  IA+AAVK I E
Sbjct: 61 ----TMPQELVADTSLNV-SKYKQAIARAAVKRIRE 91





>ref|YP_177106.1| transcriptional regulator of sugar metabolism [Bacillus clausii
           KSM-K16]
 dbj|BAD66145.1| transcriptional regulator of sugar metabolism [Bacillus clausii
           KSM-K16]
          Length = 262

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKI--MSG 64
           ERR+ I+ ++ E   + V++L+     SEAT+R DL  LE++G + R HGGA  I  M  
Sbjct: 5   ERRDSILDILRESKRITVKELSERLNVSEATLRMDLNQLEKQGKLERTHGGAILIDDMPA 64

Query: 65  NSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
            SE ET    F  R Q  +  K  +A+ A KM+ +G
Sbjct: 65  VSEKET---SFSYRKQQNTKEKTLLAEEASKMLSDG 97





>ref|ZP_00007156.1| COG1349: Transcriptional regulators of sugar metabolism
           [Rhodobacter sphaeroides 2.4.1]
          Length = 256

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M S+ER  K+++L+  +  V    LA +F  S  T+R DL  +EQ+GV+ R HGGA  + 
Sbjct: 1   MQSYERHAKVLELLAVERRVFTNQLARMFDVSRETVRRDLLDMEQEGVLVRVHGGATAV- 59

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
                    E  F ER    +  K  I   A  +I  G T
Sbjct: 60  ---ERDIAPEPAFSERLVAHAGKKAAIGALAATLIPRGST 96





>ref|YP_020484.1| transcriptional regulator, deor family [Bacillus anthracis str.
           'Ames Ancestor']
 ref|YP_029818.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
           Sterne]
 ref|NP_846099.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
           Ames]
 ref|NP_657681.1| deoR, Bacterial regulatory proteins, deoR family [Bacillus
           anthracis str. A2012]
 gb|AAP27585.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
           Ames]
 gb|AAT32959.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
           'Ames Ancestor']
 gb|AAT55869.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
           Sterne]
          Length = 250

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER   I+QLV EQ  V +Q L    A+SE+TIR DL  LE++ ++ R HGGAA +++G  
Sbjct: 5   ERHQMILQLVKEQKVVKLQQLVERTASSESTIRRDLAQLEKQRLLKRVHGGAA-VLTGKG 63

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           +  T      +  Q+    K +IA+ A  ++ +G
Sbjct: 64  QEPTMVEKSSKNIQI----KQQIAKYAASVVEQG 93





>ref|YP_152946.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gb|AAV79634.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gb|AAL22864.1| putative glycerol-3-phosphate regulon repressor [Salmonella
           typhimurium LT2]
 ref|NP_462905.1| putative glycerol-3-phosphate regulon repressor [Salmonella
           typhimurium LT2]
          Length = 267

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS-GNS 66
           R ++++ L++E+G + + +LA +   S  T+R D+R L ++G++TR HGGA +  S  N+
Sbjct: 11  RHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNT 70

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             E +EV + +        K  IA+A    I +G T
Sbjct: 71  AFEQREVSWTQE-------KKAIAEAVADYIPDGST 99





>ref|NP_469715.1| hypothetical protein lin0370 [Listeria innocua Clip11262]
 emb|CAC95603.1| lin0370 [Listeria innocua]
 pir||AC1479 regulatory protein (DeoR family) homolog lin0370 [imported] -
           Listeria innocua (strain Clip11262)
          Length = 254

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M  FER+NKII L+++   + V +L+ +   S +TIR DL  LE+ G++ + HGGA  + 
Sbjct: 1   MFPFERQNKIIHLLDQNNKITVPELSRILDVSISTIRNDLSALEESGMIKKVHGGAVLLK 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S     E +   F +R       K  IA+ A  ++    T
Sbjct: 61  S-----EEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQT 95





>ref|NP_463882.1| hypothetical protein lmo0352 [Listeria monocytogenes EGD-e]
 ref|ZP_00234269.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           1/2a F6854]
 gb|EAL05884.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           1/2a F6854]
 emb|CAC98431.1| lmo0352 [Listeria monocytogenes]
 pir||AI1118 regulatory proteins (DeoR family) homolog lmo0352 [imported] -
           Listeria monocytogenes (strain EGD-e)
          Length = 254

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M  FER+NKII L+++   + V +L+ +   S +TIR DL  LE+ G++ + HGGA  + 
Sbjct: 1   MFPFERQNKIIHLLDQNSKITVPELSRILDVSISTIRNDLSSLEESGMIKKVHGGAVLLK 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S     E +   F +R       K  IA+ A  ++    T
Sbjct: 61  S-----EEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQT 95





>ref|NP_736357.1| hypothetical protein gbs1923 [Streptococcus agalactiae NEM316]
 ref|NP_688925.1| lactose phosphotransferase system repressor [Streptococcus
           agalactiae 2603V/R]
 gb|AAN00798.1| lactose phosphotransferase system repressor [Streptococcus
           agalactiae 2603V/R]
 emb|CAD47582.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 258

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER  KII+ VN  G V V ++      S+ T+R DL  L++ G++ R HGGA K+ + + 
Sbjct: 5   ERLQKIIEKVNINGIVTVNEIMEELDVSDMTVRRDLDELDKAGLLIRIHGGAQKV-NASP 63

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             +  E    E++ + +  K  IAQ A + I++G T
Sbjct: 64  TPQNYEKSNTEKYDIQTNEKLEIAQFAKQFINDGET 99





>ref|YP_085060.1| transcriptional regulator, DeoR family [Bacillus cereus ZK]
 gb|AAU16789.1| transcriptional regulator, DeoR family [Bacillus cereus ZK]
          Length = 250

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER   I+QLV EQ  V +Q L    A+SE+TIR DL  LE++ ++ R HGGAA +++G  
Sbjct: 5   ERHQMILQLVKEQKVVKLQQLVERTASSESTIRRDLAQLEKQRLLKRVHGGAA-VLTGKG 63

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           +  T      +  Q+    K +IA+ A  ++ +G
Sbjct: 64  QEPTMVEKSSKNIQI----KQQIAKYAASVVEQG 93





>ref|YP_012981.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           4b F2365]
 ref|ZP_00229287.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           4b H7858]
 gb|EAL10903.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           4b H7858]
 gb|AAT03158.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
           4b F2365]
          Length = 254

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M  FER+NKII L+++   + V +L+ +   S +TIR DL  LE+ G++ + HGGA  + 
Sbjct: 1   MFPFERQNKIIHLLDQNSKITVPELSRILDVSISTIRNDLSSLEESGMIKKVHGGAVLLK 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
           S     E +   F +R       K  IA+ A  ++    T
Sbjct: 61  S-----EEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQT 95





>emb|CAB46398.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
 pir||T36911 probable transcription regulator - Streptomyces coelicolor
 ref|NP_626163.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
          Length = 258

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 2   TMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKI 61
           T  + ERR++I+++    G+V V  LA     ++ T+R DLR LE  G+V R HGGA  +
Sbjct: 5   TRTTEERRHEIVRVARATGSVDVTALAAELGVAKETVRRDLRALEDHGLVRRTHGGAYPV 64

Query: 62  MSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
            S   ET    + F+    +    K RIA AAV+++ +  T
Sbjct: 65  ESAGFET---TLAFRATSHVPE--KRRIASAAVELLGDAET 100





>ref|NP_832522.1| Transcriptional regulator, DeoR family [Bacillus cereus ATCC 14579]
 gb|AAP09723.1| Transcriptional regulator, DeoR family [Bacillus cereus ATCC 14579]
          Length = 261

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 4/94 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR KI++L+N  G V+ +DLA  F  S  +IR DL  +E+ G++ R HGGA ++    +
Sbjct: 5   ERREKILELLNTDGRVVAKDLAERFDMSIDSIRRDLSIMEKDGLLKRTHGGAIEL----T 60

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
                     +R+  +S  ++ IA+ AV  I EG
Sbjct: 61  RVRNLAAEPAKRYSDSSIYEDTIARVAVSYIQEG 94





>ref|NP_759628.1| Transcriptional regulator of sugar metabolism [Vibrio vulnificus
          CMCP6]
 gb|AAO09155.1| Transcriptional regulator of sugar metabolism [Vibrio vulnificus
          CMCP6]
          Length = 253

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+  RR+ I +LVNE+G V V +LA  F  SE TIR DL  LE+ G + R +GGA  I  
Sbjct: 5  NTQLRRHSISKLVNEKGEVSVDELAHKFDTSEVTIRKDLASLEKNGQLLRRYGGAIAI-- 62

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                 +EV  +E  Q  S  K ++A+ A ++I +
Sbjct: 63 ------PKEVIHEEMSQNVSDRKLKLAEKAAELIRD 92





>ref|NP_807239.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 ref|NP_458026.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gb|AAO71099.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 emb|CAD09601.1| putative DeoR-family transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi]
 pir||AG0947 probable DeoR-family transcription regulator STY3853 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
          Length = 267

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS-GNS 66
           R ++++ L++E+G + + +LA +   S  T+R D+R L ++G++TR HGGA +  S  N+
Sbjct: 11  RHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNT 70

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             E +E+ + +        K  IA+A    I +G T
Sbjct: 71  AFEQREISWTQE-------KKAIAEAVADYIPDGST 99





>ref|NP_389321.1| transcriptional regulator (DeoR family) [Bacillus subtilis subsp.
           subtilis str. 168]
 emb|CAB13311.1| transcriptional regulator (DeoR family) [Bacillus subtilis subsp.
           subtilis str. 168]
 gb|AAC24913.1| FruR [Bacillus subtilis]
 pir||B69627 transcription repressor of fructose operon fruR - Bacillus subtilis
          Length = 251

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER   II  + +   V +Q+L  +  ASE+TIR DL  LE++G + R HGGAAK+     
Sbjct: 5   ERHQLIIDQIEKHDVVKIQELINLTNASESTIRRDLSTLEERGFLKRVHGGAAKLSDIRL 64

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           E +  E   K         K +IA+ A  ++ EG
Sbjct: 65  EPDMLEKSSKNLHD-----KLKIAEKAASLLEEG 93





>ref|NP_756679.1| Hypothetical transcriptional regulator yihW [Escherichia coli
           CFT073]
 gb|AAN83253.1| Hypothetical transcriptional regulator yihW [Escherichia coli
           CFT073]
          Length = 262

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R ++++ L+ E+G + +++LA +   S  T+R D+R L ++G++TR HGGA ++ S    
Sbjct: 11  RHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRVSS---- 66

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
                  F++R    +A K  IA+A    + E  T
Sbjct: 67  --VMNTAFEQRELSLTAEKRAIAEAVADYLPERCT 99





>ref|NP_541404.1| TRANSCRIPTIONAL REGULATOR, DEOR FAMILY [Brucella melitensis 16M]
 gb|AAL53668.1| TRANSCRIPTIONAL REGULATOR, DEOR FAMILY [Brucella melitensis 16M]
 pir||AI3562 transcription regulator, deoR family BMEII0426 [imported] -
           Brucella melitensis (strain 16M)
          Length = 254

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   +RR  II L+ E   V + DLAG FA S+ TI  DL  LEQ GV+ +  GGA   +
Sbjct: 1   MKRDDRRQAIINLLIENQAVDLDDLAGRFAVSKMTIHRDLDSLEQSGVLRKVRGGAT--I 58

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              ++ E+    F+ R +     K ++A+AA++++  GMT
Sbjct: 59  GAGTQFESD---FRFRERQDGEAKLKMARAALELVEPGMT 95





>gb|AAN34041.1| transcriptional regulator, DeoR family [Brucella suis 1330]
 gb|AAD11523.1| unknown [Brucella melitensis biovar Abortus]
 ref|NP_700036.1| transcriptional regulator, DeoR family [Brucella suis 1330]
          Length = 254

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   +RR  II L+ E   V + DLAG FA S+ TI  DL  LEQ GV+ +  GGA    
Sbjct: 1   MKRDDRRQAIINLLIENQAVDLDDLAGRFAVSKMTIHRDLDSLEQSGVLRKVRGGA---- 56

Query: 63  SGNSETETQ-EVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
               +  TQ E  F+ R +     K ++A+AA++++  GMT
Sbjct: 57  --TIDAGTQFESDFRFRERQDGEAKLKMARAALELVEPGMT 95





>ref|ZP_00132400.2| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 2336]
          Length = 252

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R  KII+L+ ++G +  ++L  +   S  TIR DL  L +  ++TR HGGA  +      
Sbjct: 6   RHKKIIELIKQKGYLSTEELVNILNVSPQTIRRDLNELAENNLITRHHGGATSL------ 59

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           + ++   + ER    S+ K RI Q   K+I  G
Sbjct: 60  STSENSDYSERQHFFSSEKRRIGQEVAKIIPNG 92





>ref|NP_438777.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae Rd
           KW20]
 gb|AAC22278.1| glycerol-3-phosphate regulon repressor (glpR) [Haemophilus
           influenzae Rd KW20]
 pir||A64082 glycerol-3-phosphate regulon repressor homolog HI0619 - Haemophilus
           influenzae (strain Rd KW20)
 sp|P44784|GLPR_HAEIN Glycerol-3-phosphate regulon repressor
          Length = 255

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R  KII+LV + G +  ++L      S  TIR DL  L +  ++ R HGGAA      S 
Sbjct: 6   RHQKIIKLVEQSGYLSTEELVAALDVSPQTIRRDLNILAELDLIRRHHGGAA------SP 59

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           +  +   + +R Q  S  KN IAQ   K+I  G
Sbjct: 60  SSAENSDYVDRKQFFSLQKNNIAQEVAKLIPNG 92





>gb|AAO56674.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
           tomato str. DC3000]
 ref|NP_792979.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 252

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R ++I++L+ +Q  V   DLA +   SE TIR D + LE++G + R HGGA  I+  +SE
Sbjct: 6   RLDEIMRLLAQQQRVKASDLAQLLFVSEETIRRDFKHLEEEGRLRRIHGGA--ILPRSSE 63

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEGM 101
               E+  +ER +L    K  IA  A +++ EGM
Sbjct: 64  ----ELPLQERSRLKPRAKAGIATCAAQLVTEGM 93





>ref|NP_933294.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
          YJ016]
 dbj|BAC93265.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
          YJ016]
          Length = 253

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+  RR+ I +LVNE+G V V +LA  F  SE TIR DL  LE+ G + R +GGA  I  
Sbjct: 5  NTQLRRHSISKLVNEKGEVSVDELAHKFDTSEVTIRKDLASLEKNGQLLRRYGGAIAI-- 62

Query: 64 GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHE 99
                 +EV  +E  Q  S  K ++A+ A ++I +
Sbjct: 63 ------PKEVIHEEMSQNISDRKLKLAEKAAELIRD 92





>ref|NP_607978.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS8232]
 gb|AAL98477.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS8232]
 gb|AAK34627.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes M1 GAS]
 ref|NP_269906.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes M1 GAS]
          Length = 257

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  KI+ ++   G + V+D+      S+ T R DL  L  KG++ R HGGA  + 
Sbjct: 1   MKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLIRTHGGAQYLD 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             +++ E  E    E+  L +  K +IAQ A  +I +G T
Sbjct: 61  YSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGET 100





>ref|ZP_00365838.1| COG1349: Transcriptional regulators of sugar metabolism
           [Streptococcus pyogenes M49 591]
          Length = 257

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  KI+ ++   G + V+D+      S+ T R DL  L  KG++ R HGGA  + 
Sbjct: 1   MKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLIRTHGGAQYLD 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             +++ E  E    E+  L +  K +IAQ A  +I +G T
Sbjct: 61  YSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGET 100





>ref|NP_802920.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes SSI-1]
 ref|NP_665464.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS315]
 gb|AAM80267.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes MGAS315]
 dbj|BAC64753.1| putative lactose phosphotransferase system repressor protein
           [Streptococcus pyogenes SSI-1]
          Length = 257

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  KI+ ++   G + V+D+      S+ T R DL  L  KG++ R HGGA  + 
Sbjct: 1   MKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLIRTHGGAQYLD 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             +++ E  E    E+  L +  K +IAQ A  +I +G T
Sbjct: 61  YSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGET 100





>ref|YP_060966.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
           MGAS10394]
 gb|AAT87783.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
           MGAS10394]
          Length = 257

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ER  KI+ ++   G + V+D+      S+ T R DL  L  KG++ R HGGA  + 
Sbjct: 1   MKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLIRTHGGAQYLD 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             +++ E  E    E+  L +  K +IAQ A  +I +G T
Sbjct: 61  YSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGET 100





>gb|AAG04879.1| probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
 ref|ZP_00139121.1| COG1349: Transcriptional regulators of sugar metabolism
           [Pseudomonas aeruginosa UCBPP-PA14]
 pir||D83458 probable transcription regulator PA1490 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 ref|NP_250181.1| probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
          Length = 258

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 3   MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
           M   ERR  I++L+ ++  + V +LA   + S+ TIR DL  L ++G+V++FHGGAA   
Sbjct: 1   MRPEERRRHILELLRQRERISVDELARTLSTSQETIRRDLAALAEQGLVSKFHGGAALPP 60

Query: 63  SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           SG  E       F+ R    +  K  +A+ A  +   G
Sbjct: 61  SGEHEN-----AFQTRMNEHAQEKRAVARYAAGLFGPG 93





>ref|ZP_00123417.1| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 129PT]
          Length = 252

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R  KII+L+ ++G +  ++L    + S  TIR DL  L +  ++TR HGGA  +      
Sbjct: 6   RHKKIIELIKQKGYLSTEELVNFLSVSPQTIRRDLNELAENNLITRHHGGATSL------ 59

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           + ++   + ER    S+ K RI Q   K+I  G
Sbjct: 60  STSENSDYSERQHFFSSEKRRIGQEVAKIIPNG 92





>ref|NP_885275.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           parapertussis 12822]
 emb|CAE38383.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           parapertussis]
          Length = 269

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MT+N   R++ +++LV  QG+  ++ LA  F  +  T+R D+  L + G+++RFHGG  +
Sbjct: 8   MTLNP--RQSALVELVRTQGSATIEALARHFDVTLQTVRRDVNLLSEAGMLSRFHGG-VR 64

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           I S   E     + +++R  L +  K RIA+A  + + +G
Sbjct: 65  IESSTIE----NIAYRKRQGLHAEGKRRIAEAVARAVPDG 100





>ref|NP_881259.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           pertussis Tohama I]
 emb|CAE42919.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           pertussis Tohama I]
          Length = 262

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MT+N   R++ +++LV  QG+  ++ LA  F  +  T+R D+  L + G+++RFHGG  +
Sbjct: 1   MTLNP--RQSALVELVRTQGSATIEALARHFDVTLQTVRRDVNLLSEAGMLSRFHGG-VR 57

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           I S   E     + +++R  L +  K RIA+A  + + +G
Sbjct: 58  IESSTIE----NIAYRKRQGLHAEGKRRIAEAVARAVPDG 93





>ref|NP_889595.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           bronchiseptica RB50]
 emb|CAE33551.1| glycerol-3-phosphate regulon repressor protein [Bordetella
           bronchiseptica RB50]
          Length = 269

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 1   MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK 60
           MT+N   R++ +++LV  QG+  ++ LA  F  +  T+R D+  L + G+++RFHGG  +
Sbjct: 8   MTLNP--RQSALVELVRTQGSATIEALARHFDVTLQTVRRDVNLLSEAGMLSRFHGG-VR 64

Query: 61  IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           I S   E     + +++R  L +  K RIA+A  + + +G
Sbjct: 65  IESSTIE----NIAYRKRQGLHAEGKRRIAEAVARAVPDG 100





>ref|YP_087379.1| GlpR protein [Mannheimia succiniciproducens MBEL55E]
 gb|AAU36794.1| GlpR protein [Mannheimia succiniciproducens MBEL55E]
          Length = 258

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 34/99 (34%), Positives = 51/99 (51%)

Query: 4   NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
           N+ +RR+ I+QL+ ++G V V+ L  +F  SE TIR DL  LE  G + R +GGA  +  
Sbjct: 9   NTQQRRHGIMQLLQQKGEVSVEQLVQLFETSEVTIRKDLTALESNGFLLRRYGGAILMPQ 68

Query: 64  GNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
              +    E   K++  +A A   RI      +I  G T
Sbjct: 69  DLMDESQDENLSKQKLSIAKAAAERIRDHHRIIIDSGST 107





>emb|CAB96011.1| putative transcriptional regulatory protein [Streptomyces
           coelicolor A3(2)]
 ref|NP_625321.1| putative transcriptional regulatory protein [Streptomyces
           coelicolor A3(2)]
          Length = 274

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           +RR  I+  V  +G V V +L      S+ T+R DL  L ++GV+ + HGGA  +    +
Sbjct: 11  QRRALILDEVRRRGGVRVNELTRKLGVSDMTVRRDLDALSRQGVLEKVHGGAVPV----A 66

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           E  T E GF+ +  L    K  IA+AA +++  G
Sbjct: 67  EASTHEPGFEAKSGLEPTAKEDIARAAAELVAPG 100





>ref|ZP_00123001.2| COG1349: Transcriptional regulators of sugar metabolism
           [Haemophilus somnus 129PT]
          Length = 257

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 9/96 (9%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R   I+QL+N  G V V DLA  F  S  TIR DL  L+++G++ R HGGA         
Sbjct: 11  RETLILQLINSSGKVNVNDLAKQFDVSVETIRRDLTDLDKRGLIHRVHGGAV-------S 63

Query: 68  TETQEVG--FKERFQLASAPKNRIAQAAVKMIHEGM 101
            + ++VG  F+ R +     K  IA +A++ + EG+
Sbjct: 64  RKAKDVGSSFQSRQRFNCDKKRAIAASAIEYMFEGI 99





>gb|AAQ87128.1| Transcriptional repressor [Rhizobium sp. NGR234]
          Length = 251

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 13  IQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQE 72
           + ++ E GT  V+DL+  F  S+ T+  DL  LEQ G++ + HGGA+   S   E++   
Sbjct: 1   MDVLMEAGTASVEDLSIRFGVSKMTVHRDLDDLEQAGLLRKVHGGASIQSSPQFESD--- 57

Query: 73  VGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             F+ R ++A+A K RIA+ AV +I  G +
Sbjct: 58  --FRYREKIATAEKRRIAEHAVTLIEPGQS 85





>ref|NP_833445.1| Fructose repressor [Bacillus cereus ATCC 14579]
 gb|AAP10646.1| Fructose repressor [Bacillus cereus ATCC 14579]
          Length = 250

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ER   I+QLV EQ  V +Q L     +SE+TIR DL  LE++ ++ R HGGAA +++G  
Sbjct: 5   ERHQMILQLVKEQKVVKLQQLVERTESSESTIRRDLAQLEKQRLLKRVHGGAA-VLTGKG 63

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
           +  T      +  Q+    K +IA+ A  +I +G
Sbjct: 64  QEPTMVEKSSKNIQI----KQQIAKYAASVIEQG 93





>ref|NP_720258.1| transcriptional regulator, DeoR family [Shewanella oneidensis
          MR-1]
 gb|AAN57701.1| transcriptional regulator, DeoR family [Shewanella oneidensis
          MR-1]
          Length = 256

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 11/97 (11%)

Query: 4  NSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS 63
          N+ +RR+ II ++NEQG V V +L+  F  SE TIR DL  LE+ G++ R +GGA  I  
Sbjct: 5  NTQQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAVAI-- 62

Query: 64 GNSETETQEVGFKERFQLASAP-KNRIAQAAVKMIHE 99
                  EV   ++F    AP K  IA+AA ++I +
Sbjct: 63 ------PDEV--TQQFSAKIAPNKLSIAKAAAQLIKD 91





>ref|NP_709684.2| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
           str. 301]
 gb|AAN45391.2| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
           str. 301]
 ref|NP_838998.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
           str. 2457T]
 gb|AAP18809.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
           str. 2457T]
          Length = 261

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS-GNS 66
           R ++++ L+ E+G + + +LA +   S  T+R D+R L ++G++TR HGGA +  S  N+
Sbjct: 11  RHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNT 70

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT 102
             E +EV   E+       K  IA+A    I +G T
Sbjct: 71  AFEQREVSQTEK-------KKAIAEAVADYIPDGST 99





>ref|NP_471761.1| hypothetical protein lin2431 [Listeria innocua Clip11262]
 emb|CAC97658.1| lin2431 [Listeria innocua]
 pir||AB1736 regulatory protein DeoR family homolog lin2431 [imported] -
          Listeria innocua (strain Clip11262)
          Length = 250

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 28/74 (37%), Positives = 44/74 (59%)

Query: 3  MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM 62
          M + ER+  I++ + + G + +Q+L      SE+TIR DL  LE++G++ R HGGA  ++
Sbjct: 1  MLNAERKQLIMESIEKLGVIKLQELVEGLDTSESTIRRDLIELEEQGLIERVHGGAKLVI 60

Query: 63 SGNSETETQEVGFK 76
          S N E    E  FK
Sbjct: 61 SHNQEPSMNEKSFK 74





>ref|NP_979102.1| transcriptional regulator, DeoR family [Bacillus cereus ATCC 10987]
 gb|AAS41710.1| transcriptional regulator, DeoR family [Bacillus cereus ATCC 10987]
          Length = 256

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR KI++L+ + G V+ +DLA  F  S  +IR DL  +E+ G++ R HGGA ++    +
Sbjct: 5   ERREKILELLKKNGRVIAKDLAESFDMSIDSIRRDLSIMEKDGLLKRTHGGAIEL----A 60

Query: 67  ETETQEVGFKERFQLASAPKNRIAQAAVKMIHEG 100
                     ER+   S  ++ IA+ A   I EG
Sbjct: 61  RVRNLAAERFERYSNGSVYEDAIAKIAASYIQEG 94





>ref|ZP_00205356.1| COG1349: Transcriptional regulators of sugar metabolism
           [Pseudomonas syringae pv. syringae B728a]
          Length = 252

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 8   RRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSE 67
           R ++I++L+ +Q  V   DLA +   SE TIR D + LE++G + R HGGA  I+  +SE
Sbjct: 6   RLDEIMRLLAQQQRVKASDLAQLLFVSEETIRRDFKHLEEEGRLRRIHGGA--ILPRSSE 63

Query: 68  TETQEVGFKERFQLASAPKNRIAQAAVKMIHEGM 101
               E+  +ER +L    K  IA  A +++ EGM
Sbjct: 64  ----ELPLQERSRLKPRAKACIAVRAAQLVSEGM 93





>dbj|BAC19646.1| putative transcription regulator [Corynebacterium efficiens YS-314]
 ref|NP_739446.1| putative transcription regulator [Corynebacterium efficiens YS-314]
          Length = 267

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 7   ERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNS 66
           ERR +I Q+V E+G++ V DL      SE T+R DL  LE++GV+ R HGGA  +     
Sbjct: 16  ERRARIAQVVQERGSIRVVDLVDPLGVSEPTLRKDLTILEKEGVLKRTHGGAIAVEGAVP 75

Query: 67  ETETQEVG-FKERFQLASAPKNRIAQAAVKMIHE 99
           E   Q       +     A K+ IA+  + MI +
Sbjct: 76  EVADQPTSPAPPQPATPQATKDGIARYCLDMIED 109








  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Feb 17, 2005 10:55 AM
  Number of letters in database: 790,010,076
  Number of sequences in database:  2,329,789
  
Lambda     K      H
   0.318    0.129    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,364,630
Number of Sequences: 2329789
Number of extensions: 835524
Number of successful extensions: 2347
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2303
Number of HSP's gapped (non-prelim): 42
length of query: 112
length of database: 790,010,076
effective HSP length: 80
effective length of query: 32
effective length of database: 603,626,956
effective search space: 19316062592
effective search space used: 19316062592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)