PROSITE: PDOC00933 (documentation file)

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# PROSITE: PDOC00933 (documentation)

    {PDOC00933}
    {PS01213; GLOBIN_FAM_2}
    {BEGIN}
    **********************************************
    * Protozoan/cyanobacterial globins signature *
    **********************************************

    Globins are heme-containing  proteins involved in  binding and/or transporting
    oxygen [1]. Almost all globins belong to a large family (see <PDOC00793>), the
    only exceptions  are  the  following proteins which form a family of their own
    [2,3]:

     - Monomeric  hemoglobins  from the protozoan Paramecium caudatum, Tetrahymena
       pyriformis and Tetrahymena thermophila.
     - Cyanoglobin from the cyanobacteria Nostoc commune.
     - Globins  LI637  and  LI410  from  the chloroplast of the alga Chlamydomonas
       eugametos.
     - Mycobacterium tuberculosis hypothetical protein MtCY48.23.

    These proteins  contain a conserved histidine which could be involved in heme-
    binding. As a signature pattern, we use a conserved region that ends with this
    residue.

    -Consensus pattern: F-[LF]-x(5)-G-[PA]-x(4)-G-[KRA]-x-[LIVM]-x(3)-H
    -Sequences known to belong to this class detected by the pattern: ALL.
    -Other sequence(s) detected in SWISS-PROT: NONE.
    -Last update: November 1997 / First entry.

    [ 1] Concise Encyclopedia Biochemistry, Second Edition, Walter de Gruyter,
         Berlin New-York (1988).
    [ 2] Takagi T.
         Curr. Opin. Struct. Biol. 3:413-418(1993).
    [ 3] Couture M., Chamberland H., St-Pierre B., Lafontaine J., Guertin M.;
         Mol. Gen. Genet. 243:185-197(1994).

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    {END}

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