BLAST Search Results

    TBLASTX 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|1348853|gb|G26621.1|G26621 human STS STS_D12006.
             (615 letters)

    Database: Non-redundant Database of GenBank STS Division
               89,526 sequences; 32,906,604 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

### Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
    Sequences producing significant alignments:                    (bits)  Value  N

    gb|G26621|G26621  human STS STS_D12006. >gi|1396339|gb|G...   398  e-111  1
    gb|G25784|G25784  human STS EST47998.                         302  2e-82  1
    gb|G41148|G41148  Z7324 Zebrafish AB Danio rerio STS gen...    31  1.1  1
    emb|Z53521|HSB316XA9  H.sapiens (D22S1166) DNA segment c...    30  1.5  1
    gb|G42865.1|G42865  Xq3845 KWOK Homo sapiens STS genomic...    30  2.1  1
    gb|G49246.1|G49246  stbK116F5_30376 chromosome 22 genomi...    29  2.9  1
    gb|G53947.1|G53947  SHGC-85304 Human Homo sapiens STS ge...    29  5.5  1
    gb|G55375.1|G55375  SHGC-100697 Human Homo sapiens STS g...    29  5.5  1
    gb|G33174|G33174  human STS SHGC-6097 clone pG-2470            28  7.5  1
    gb|L77996|HUMSWX945  Human chromosome X STS sWXD945, sin...    28  7.5  1
    dbj|AU046883.1|AU046883  Rattus norvegicus, OTSUKA clone...    28  7.5  1
    gb|G36957|G36957  SHGC-56642 Human Homo sapiens STS cDNA       28  7.5  1

     gb|G26621|G26621 human STS STS_D12006. >gi|1396339|gb|G27620|G27620 human STS
               SHGC-32705.
               Length = 615

     Score =  367 bits (796), Expect = e-102
     Identities = 200/200 (100%), Positives = 200/200 (100%)
     Frame = +2 / +2

    Query: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181
               IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNALMQNPLTKA
    Sbjct: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181

    Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361
               HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYE AL *
    Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361

    Query: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXXGXRXXXLX 541
               S*NGFPKLVTHGPG V L L GLSSFQEF STVANPWG *         F  G R   L
    Sbjct: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXXGXRXXXLX 541

    Query: 542 XXXGGCXXVXXVXXXWXXXF 601
                  GGC  V  V   W   F
    Sbjct: 542 XXXGGCXXVXXVXXXWXXXF 601

     Score =  340 bits (736), Expect = 9e-94
     Identities = 204/204 (100%), Positives = 204/204 (100%)
     Frame = +3 / +3

    Query: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182
               SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR
    Sbjct: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182

    Query: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYSIMXQHSXN 362
               IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYSIM QHS N
    Sbjct: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYSIMXQHSXN 362

    Query: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXGVXXWXGXLXXXXFXGAXGGXGXX 542
               PKMDFQSWLHMAL  SY*   GFL FRS GQRWQI GV  W G L    F GA GG G
    Sbjct: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXGVXXWXGXLXXXXFXGAXGGXGXX 542

    Query: 543 SXXVGAXGXXXFXXXGXXXXXXXW 614
               S  VGA G   F   G       W
    Sbjct: 543 SXXVGAXGXXXFXXXGXXXXXXXW 614

     Score =  350 bits (759), Expect = 6e-97
     Identities = 195/205 (95%), Positives = 195/205 (95%)
     Frame = +1 / +1

    Query: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180
               DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS
    Sbjct: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180

    Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360
               A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL* ST V
    Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360

    Query: 361 ILKWISKAGYTWPWXXXIXFXXAFFXXXXXXXXXXXXXXLXGXVX*XXXXSXGPXXXXVX 540
               ILKWISKAGYTWPW   I F  AFF              L G V *    S GP    V
    Sbjct: 361 ILKWISKAGYTWPWXXXIXFXXAFFXSGVXVNGGKSXGXLXGXVX*XXXXSXGPXXXXVX 540

    Query: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615
                P GWV  G F F      F   LG
    Sbjct: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615

     Score =  398 bits (864), Expect = e-111
     Identities = 205/205 (100%), Positives = 205/205 (100%)
     Frame = -1 / -1

    Query: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFATVDXNS*X 436
               PK   K      KTK T  HPP W  N   LWP      L N   * P GFATVD NS*
    Sbjct: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFATVDXNS*X 436

    Query: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*A 256
               EESP K N T PGPCVTSFGNPF*DY SA S*CCIFFLPGFGVPRLFVHQNNGCKGEN*A
    Sbjct: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*A 256

    Query: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E 76
               VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E
    Sbjct: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E 76

    Query: 75  LCIHSHFSCQSGQNEESHEWRGILI 1
               LCIHSHFSCQSGQNEESHEWRGILI
    Sbjct: 75  LCIHSHFSCQSGQNEESHEWRGILI 1

     Score =  390 bits (846), Expect = e-109
     Identities = 196/196 (100%), Positives = 196/196 (100%)
     Frame = -3 / -3

    Query: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKXRKPX*XQX 410
               P   N  NP APT    *P PP AP K      P  L TP ICHR*PKLLK RKP * Q
    Sbjct: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKXRKPX*XQX 410

    Query: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC 230
               D  RAMCNQLWKSILGL EC FIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC
    Sbjct: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC 230

    Query: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL 50
               GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL
    Sbjct: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL 50

    Query: 49  SKWTK*RVS*VEGHSD 2
               SKWTK*RVS*VEGHSD
    Sbjct: 49  SKWTK*RVS*VEGHSD 2

     Score =  281 bits (608), Expect = 4e-76
     Identities = 122/122 (100%), Positives = 122/122 (100%)
     Frame = -2 / -2

    Query: 368 FRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLHKKQCWFEI 189
               FRIT*VL HNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLHKKQCWFEI
    Sbjct: 368 FRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLHKKQCWFEI 189

    Query: 188 TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKMKSLMSGGA 9
               TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKMKSLMSGGA
    Sbjct: 188 TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKMKSLMSGGA 9

    Query: 8   F* 3
               F*
    Sbjct: 8   F* 3

     gb|G25784|G25784 human STS EST47998.
               Length = 617

     Score =  273 bits (590), Expect = 1e-73
     Identities = 121/133 (90%), Positives = 121/133 (90%)
     Frame = +1 / +1

    Query: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180
               DQ APPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTK  NAKSLDKS
    Sbjct: 1   DQXAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKXXNAKSLDKS 180

    Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360
               A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL* ST
    Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*NSTQ* 360

    Query: 361 ILKWISKAGYTWP 399
                    SKAGYT P
    Sbjct: 361 S*NGFSKAGYTXP 399

     Score =  289 bits (626), Expect = 1e-78
     Identities = 129/158 (81%), Positives = 131/158 (82%)
     Frame = +2 / +2

    Query: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181
               IR PLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGL  LMQNPLTKA
    Sbjct: 2   IRXPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLXPLMQNPLTKA 181

    Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361
               HRLFQTSIVFYVTCFTASSQQLLTTAQF PLQPLFWWTNNLGTPNPGRKNIQHYE AL
    Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFFPLQPLFWWTNNLGTPNPGRKNIQHYETALSN 361

    Query: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWG 475
                   FPKLVTH    +         +Q F ST ANPWG
    Sbjct: 362 PKMDFPKLVTHXLQSLI*I*KAFLIYQGFRSTXANPWG 475

     Score =  248 bits (535), Expect = 5e-66
     Identities = 128/157 (81%), Positives = 129/157 (81%)
     Frame = +3 / +3

    Query: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182
               S CPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*  *CKIP*QKR
    Sbjct: 3   SXCPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*XX*CKIP*QKR 182

    Query: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYSIMXQHSXN 362
               IGYFKPALFFM*PVLPHLLSSF*PLLNF LYSHCSGGQIT*VLQILAGKIYSIM QHS
    Sbjct: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFFLYSHCSGGQIT*VLQILAGKIYSIMKQHSVI 362

    Query: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXG 473
                K  FQSWLHM     +     F   R  GQR Q  G
    Sbjct: 363 LKWIFQSWLHMXCKVLFKFKRPFSFTRGLGQRXQTPG 473

     Score =  302 bits (653), Expect = 2e-82
     Identities = 128/157 (81%), Positives = 132/157 (83%)
     Frame = -3 / -2

    Query: 472 PXICHR*PKLLKXRKPX*XQXDXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VIC 293
               P +C R*PK L   K         + MCNQLWK    + EC FIMLYIFPARIWST*VIC
    Sbjct: 472 PGVCXR*PKPLVNEKGLLNLNKTLQXMCNQLWKIHFRITECCFIMLYIFPARIWST*VIC 293

    Query: 292 PPEQWL*RRKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWL 113
               PPEQWL*R+KLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*  *SKSGPIQRMWL
    Sbjct: 292 PPEQWL*RKKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*XX*SKSGPIQRMWL 113

    Query: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHSD 2
               KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEG SD
    Sbjct: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGXSD 2

     Score =  276 bits (598), Expect = 1e-74
     Identities = 122/130 (93%), Positives = 122/130 (93%)
     Frame = -2 / -1

    Query: 398 GHV*PALEIHFRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR 219
               GHV*PALE  F   *VL HNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR
    Sbjct: 398 GHV*PALENPF*DY*VLFHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR 219

    Query: 218 LHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD 39
               LHKKQCWFEITYALLSRDFAL  LVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD
    Sbjct: 218 LHKKQCWFEITYALLSRDFALXXLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD 39

    Query: 38  KMKSLMSGGA 9
               KMKSLMSGGA
    Sbjct: 38  KMKSLMSGGA 9

     Score =  290 bits (628), Expect = 7e-79
     Identities = 119/131 (90%), Positives = 120/131 (90%)
     Frame = -1 / -3

    Query: 393 CVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*AVVRSC*EDAVKQVT 214
               CVTSFG       SA S*CCIFFLPGFGVPRLFVHQNNGCKG+N*AVVRSC*EDAVKQVT
    Sbjct: 393 CVTSFGKSILGLLSAVS*CCIFFLPGFGVPRLFVHQNNGCKGKN*AVVRSC*EDAVKQVT 214

    Query: 213 *KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN 34
               *KTMLV*NNLCAFVKGFCI  FSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN
    Sbjct: 213 *KTMLV*NNLCAFVKGFCIXGFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN 34

    Query: 33  EESHEWRGILI 1
               EESHEWRG LI
    Sbjct: 33  EESHEWRGXLI 1

     gb|G41148|G41148 Z7324 Zebrafish AB Danio rerio STS genomic
               Length = 351

     Score = 30.8 bits (61), Expect = 1.1
     Identities = 11/27 (40%), Positives = 18/27 (65%)
     Frame = +1 / +2

    Query: 211 LCNLFYRIFSAASDHCSIFSFTAIVLV 291
               L NL +R+F++  DHCS+  F   V++
    Sbjct: 2   LTNLIFRLFTSK*DHCSLKQFNNKVVI 82

     emb|Z53521|HSB316XA9 H.sapiens (D22S1166) DNA segment containing (CA) repeat; clone
               AFMb316xa9; single read, sequence tagged site [Homo
               sapiens]
               Length = 345

     Score = 30.4 bits (60), Expect = 1.5
     Identities = 10/19 (52%), Positives = 13/19 (67%)
     Frame = -3 / +1

    Query: 316 IWST*VICPPEQWL*RRKL 260
               +W T  +CPP  W *RR+L
    Sbjct: 226 LWGTAPLCPPVPWA*RRQL 282

     gb|G42865.1|G42865 Xq3845 KWOK Homo sapiens STS genomic, sequence tagged site
               Length = 1200

     Score = 29.9 bits (59), Expect = 2.1
     Identities = 10/24 (41%), Positives = 14/24 (57%)
     Frame = -3 / -2

    Query: 106 PFWPFLFLLRALHTFPLFLSKWTK 35
               P WP + LL  +H+FP  +  W K
    Sbjct: 716 PEWPSINLLPGMHSFPRVIPCWEK 645

     gb|G49246.1|G49246 stbK116F5_30376 chromosome 22 genomic clone Homo sapiens STS
               genomic clone 116F5, sequence tagged site
               Length = 375

     Score = 29.5 bits (58), Expect = 2.9
     Identities = 15/34 (44%), Positives = 17/34 (49%)
     Frame = -3 / -2

    Query: 106 PFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHS 5
               P W   FLLR LHT P    K+    V+  EG S
    Sbjct: 176 PGWTLRFLLRGLHTPPKAAEKFPSQGVAEPEGFS 75

     gb|G53947.1|G53947 SHGC-85304 Human Homo sapiens STS genomic, sequence tagged site
               Length = 444

     Score = 28.6 bits (56), Expect = 5.5
     Identities = 10/24 (41%), Positives = 15/24 (61%)
     Frame = +1 / -2

    Query: 202 HCFLCNLFYRIFSAASDHCSIFSF 273
               HC L ++F RIF    +  S+F+F
    Sbjct: 443 HCHLSSVFCRIFFTLEESLSLFAF 372

     gb|G55375.1|G55375 SHGC-100697 Human Homo sapiens STS genomic, sequence tagged site
               Length = 460

     Score = 28.6 bits (56), Expect = 5.5
     Identities = 9/28 (32%), Positives = 16/28 (57%)
     Frame = +3 / +1

    Query: 15  STHETLHFVHFDRKSGNVCRALKRNKKG 98
               +TH    F+H  +K  N+C  +  N++G
    Sbjct: 82  TTHSMTVFLHVKKKLSNICIYMPENREG 165

     gb|G33174|G33174 human STS SHGC-6097 clone pG-2470
               Length = 299

     Score = 28.1 bits (55), Expect = 7.5
     Identities = 13/38 (34%), Positives = 19/38 (49%)
     Frame = +1 / +2

    Query: 175 KSA*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVL 288
               +SA +I   HC    +   +FS ASD  S    T ++L
    Sbjct: 119 QSAWIIGMSHCAWAVIHCLLFSTASDEKSAVDLTGVLL 232

     gb|L77996|HUMSWX945 Human chromosome X STS sWXD945, single read.
               Length = 196

     Score = 28.1 bits (55), Expect = 7.5
     Identities = 9/33 (27%), Positives = 19/33 (57%)
     Frame = +3 / -2

    Query: 24  ETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHI 122
               E +H+V F +  G +  + ++ ++ QN   SH+
    Sbjct: 141 EKIHYVLF*KNCGKIMTS*RQRQENQNNLLSHV 43

     dbj|AU046883.1|AU046883 Rattus norvegicus, OTSUKA clone, 085f03, microsatellite sequence,
               sequence tagged site
               Length = 351

     Score = 28.1 bits (55), Expect = 7.5
     Identities = 8/26 (30%), Positives = 15/26 (56%)
     Frame = +1 / +3

    Query: 205 CFLCNLFYRIFSAASDHCSIFSFTAI 282
               CF+C L  +I+  A +   +  FT++
    Sbjct: 249 CFICKLVLKIYLRAEERTQLIEFTSL 326

     gb|G36957|G36957 SHGC-56642 Human Homo sapiens STS cDNA
               Length = 466

     Score = 28.1 bits (55), Expect = 7.5
     Identities = 10/15 (66%), Positives = 11/15 (72%)
     Frame = -3 / -3

    Query: 115 LKAPFWPFLFLLRAL 71
               L  PFW FLF L+AL
    Sbjct: 242 LSVPFWKFLFYLQAL 198

      Database: Non-redundant Database of GenBank STS Division
        Posted date:  Dec 28, 1999  3:49 PM
      Number of letters in database: 32,906,604
      Number of sequences in database:  89,526

    Lambda     K      H
       0.318    0.135    0.401

    Matrix: BLOSUM62
    Number of Hits to DB: 1st pass: 41589935, 2nd pass: 9765
    Number of Sequences: 1st pass: 89526, 2nd pass: 84
    Number of extensions: 1st pass: 501394, 2nd pass: 6747
    Number of successful extensions: 1st pass: 14, 2nd pass: 49
    Number of sequences better than 10.0: 20
    length of query: 205
    length of database: 10,968,868
    effective HSP length: 46
    effective length of query: 158
    effective length of database: 6,850,672
    effective search space: 1082406176
    effective search space used: 1082406176
    frameshift window, decay const: 50,  0.5
    T: 13
    A: 40
    X1: 16 ( 7.3 bits)
    X2: 0 ( 0.0 bits)
    S1: 41 (21.7 bits)
    S2: 52 (26.7 bits)