BLAST Search Results

    BLASTP 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|1718062|sp|P16153|UTXA_CLODI UTXA PROTEIN.
             (166 letters)

    Database: Non-redundant SwissProt sequences
               82,258 sequences; 29,652,561 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

### Distribution of 6 Blast Hits on the Query Sequence

     sp|P16153|UTXA_CLODI UTXA PROTEIN
               Length = 166

     Score =  332 bits (843), Expect = 2e-91
     Identities = 166/166 (100%), Positives = 166/166 (100%)

    Query: 1   MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR 60
               MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR
    Sbjct: 1   MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR 60

    Query: 61  KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI 120
               KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI
    Sbjct: 61  KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI 120

    Query: 121 LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK 166
               LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK
    Sbjct: 121 LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK 166

     sp|P24811|YQXH_BACSU HYPOTHETICAL 15.7 KD PROTEIN IN SPOIIIC-CWLA INTERGENIC REGION
               (ORF2)
               Length = 140

     Score = 39.5 bits (90), Expect = 0.004
     Identities = 27/130 (20%), Positives = 55/130 (41%), Gaps = 19/130 (14%)

    Query: 37  FIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFL 96
               ++ L+++    D L G + A K +K  S     G +RK+     +   +V+D +   N
    Sbjct: 26  YLDLLLVLSIIDVLTGVIKAWKFKKLRSRSAWFGYVRKLLNFFAVILANVIDTVLNLN-- 83

    Query: 97  FMLPQDCINFLRLKHLGISEFFSILF-ILYESVSILKNMCLCGLPVPKRLKEKIAILLDA 155
                               G+  F ++LF I  E +SI +N+   G+ +P  + +++  + +
    Sbjct: 84  ----------------GVLTFGTVLFYIANEGLSITENLAQIGVKIPSSITDRLQTIENE 127

    Query: 156 MTDEMNAKDE 165
                    N  D+
    Sbjct: 128 KEQSKNNADK 137

     sp|P26835|YNGD_CLOPE HYPOTHETICAL 14.9 KD PROTEIN IN NAGH 3'REGION (ORFD)
               Length = 132

     Score = 38.7 bits (88), Expect = 0.007
     Identities = 24/110 (21%), Positives = 52/110 (46%), Gaps = 18/110 (16%)

    Query: 41  VILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVD-ILTKFNFLFML 99
               +++ I  D L G +   KS++  S+ G+ G  +K  ++  +    ++D +L    ++F
    Sbjct: 33  LLVFIFLDYLTGVIKGCKSKELCSNIGLRGITKKGLILVVLLVAVMLDRLLDNGTWMFRT 92

    Query: 100 PQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKI 149
                                  +  +I+ E +SIL+N    G+P+P++LK+ +
    Sbjct: 93  -----------------LIAYFYIMNEGISILENCAALGVPIPEKLKQAL 125

     sp|O78935|CYB_MARAM CYTOCHROME B
               Length = 379

     Score = 29.3 bits (64), Expect = 4.6
     Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

    Query: 80  CIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCL 136
               C+F+L V D+LT   ++   P +   F+ +  L    +F+IL IL  ++SI++N  L
    Sbjct: 323 CLFWLLVADLLT-LTWIGGQPVEH-PFITIGQLASILYFAILLILMPAISIIENNLL 377

     sp|P47694|Y456_MYCGE HYPOTHETICAL PROTEIN MG456
               Length = 334

     Score = 29.0 bits (63), Expect = 6.0
     Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

    Query: 90  LTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKN 133
               LTKFN  F+ P     FLR+  +G+   FS++ I +   S  +N
    Sbjct: 4   LTKFNKFFLTPNKLNAFLRV--IGLCGLFSVIAISFGIYSYTRN 45

     sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439
               Length = 361

     Score = 28.6 bits (62), Expect = 7.8
     Identities = 19/56 (33%), Positives = 30/56 (52%), Gaps = 12/56 (21%)

    Query: 106 FLRLKHLGIS---EFFSILFILYES----VSILKNMC-----LCGLPVPKRLKEKI 149
               ++ L+ + IS   +F  +LF  YE     V I+K++      LCG+P PK   E+I
    Sbjct: 68  YINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEI 123

      Database: Non-redundant SwissProt sequences
        Posted date:  Dec 18, 1999  8:26 PM
      Number of letters in database: 29,652,561
      Number of sequences in database:  82,258

    Lambda     K      H
       0.331    0.146    0.428

    Gapped
    Lambda     K      H
       0.270   0.0470    0.230

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 8801581
    Number of Sequences: 82258
    Number of extensions: 320828
    Number of successful extensions: 892
    Number of sequences better than 10.0: 6
    Number of HSP's better than 10.0 without gapping: 3
    Number of HSP's successfully gapped in prelim test: 3
    Number of HSP's that attempted gapping in prelim test: 888
    Number of HSP's gapped (non-prelim): 6
    length of query: 166
    length of database: 29,652,561
    effective HSP length: 46
    effective length of query: 120
    effective length of database: 25,868,693
    effective search space: 3104243160
    effective search space used: 3104243160
    T: 11
    A: 40
    X1: 15 ( 7.2 bits)
    X2: 38 (14.8 bits)
    X3: 64 (24.9 bits)
    S1: 40 (21.9 bits)
    S2: 62 (28.6 bits)