BLAST Search Results

    BLASTN 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|859351|gb|G06106.1|G06106 human STS WI-6344.
             (183 letters)

    Database: Non-redundant Database of GenBank STS Division
               89,405 sequences; 32,867,852 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

### Distribution of 6 Blast Hits on the Query Sequence

                                                                       Score     E
    Sequences producing significant alignments:                        (bits)  Value

    gb|G06106|G06106  human STS WI-6344.                              327  1e-89
    gb|G21024|G21024  human STS WI-30979.                              32  1.1
    gb|G60966.1|G60966  SHGC-84377 Human Homo sapiens STS genomi...    30  4.2
    gb|G51244.1|G51244  SHGC-80725 Human Homo sapiens STS genomi...    30  4.2
    gb|G20319|G20319  human STS A005L39.                               30  4.2
    gb|G07281|G07281  human STS WI-9430.                               30  4.2

    blast_tmp 1   acttgggnctacatgggccagaggtggtttattcagtctccataagagaggggacaaacg 60
    G06106    1   ............................................................ 60
    G60966    49                                       ...............         63
    G20319    53                    ...............                            39
    G07281    172                   ...............                            158

    blast_tmp 61  gcacagttgggtccgtgaagaggagggtccaagagctnacaagagagcctctctgagatt 120
    G06106    61  ............................................................ 120
    G21024    33           .............a......                                14

    blast_tmp 121 tgacccctncatcccctnctcagggnggttgtggagtcactgggcctcatgggntaggcc 180
    G06106    121 ............................................................ 180
    G51244    184                                     ...............          198

    blast_tmp 181 cag 183
    G06106    181 ... 183

      Database: Non-redundant Database of GenBank STS Division
        Posted date:  Dec 18, 1999  7:45 PM
      Number of letters in database: 32,867,852
      Number of sequences in database:  89,405

    Lambda     K      H
        1.37    0.711     1.31

    Gapped
    Lambda     K      H
        1.37    0.711     1.31

    Matrix: blastn matrix:1 -3
    Gap Penalties: Existence: 5, Extension: 2
    Number of Hits to DB: 1988
    Number of Sequences: 89405
    Number of extensions: 1988
    Number of successful extensions: 517
    Number of sequences better than 10.0: 8
    length of query: 183
    length of database: 32,867,852
    effective HSP length: 16
    effective length of query: 167
    effective length of database: 31,437,372
    effective search space: 5250041124
    effective search space used: 5250041124
    T: 0
    A: 0
    X1: 6 (11.9 bits)
    X2: 10 (19.8 bits)
    S1: 12 (24.3 bits)
    S2: 15 (30.2 bits)