BLAST Search Results

    BLASTP 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|729002|sp|Q06110|CAGA_STRGL ANTITUMOR ANTIBIOTIC
    C-1027 APOPROTEIN PRECURSOR (C-1027-AG).
             (143 letters)

    Database: Non-redundant SwissProt sequences
               82,258 sequences; 29,652,561 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

     sp|Q06110|CAGA_STRGL ANTITUMOR ANTIBIOTIC C-1027 APOPROTEIN PRECURSOR (C-1027-AG)
               Length = 143

     Score =  187 bits (471), Expect = 7e-48
     Identities = 95/143 (66%), Positives = 95/143 (66%)

    Query: 1   MSLRHMSRRASRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
               MSLRHMSRRASRF
    Sbjct: 1   MSLRHMSRRASRFGVVAVASIGLAAAAQSVAFAAPAFSVSPASGLSDGQSVSVSVSGAAA 60

    Query: 61  XETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCA 120
                ETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCA
    Sbjct: 61  GETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCA 120

    Query: 121 TAACNLGAGNSGLDLGHVALTFG 143
               TAACNLGAGNSGLDLGHVALTFG
    Sbjct: 121 TAACNLGAGNSGLDLGHVALTFG 143

     sp|P01551|ATXA_STRGL ACTINOXANTHIN PRECURSOR (AXN)
               Length = 143

     Score =  183 bits (460), Expect = 1e-46
     Identities = 93/143 (65%), Positives = 93/143 (65%)

    Query: 1   MSLRHMSRRASRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
               MSLRHMSRRASRF
    Sbjct: 1   MSLRHMSRRASRFGVVAVASIGLAAAAQSVAFAAPAFSVSPASGLSDGQSVSVSVSGAAA 60

    Query: 61  XETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCA 120
                ETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSY GSTPEGTPVGSVDCA
    Sbjct: 61  GETYYIAQCAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYAGSTPEGTPVGSVDCA 120

    Query: 121 TAACNLGAGNSGLDLGHVALTFG 143
               T ACNLGAGNSGLDLGHVALTFG
    Sbjct: 121 TDACNLGAGNSGLDLGHVALTFG 143

     sp|P01550|NCZS_STRCZ NEOCARZINOSTATIN PRECURSOR (NCS) (MITOMALCIN) (MMC)
               Length = 147

     Score = 65.2 bits (156), Expect = 6e-11
     Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 5/72 (6%)

    Query: 64  YYIAQCAPVG-GQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCATA 122
               Y + QCA V  G  ACNPA  +S T DA+G+AS S  VR+S+ G   +GT  G+VDC TA
    Sbjct: 66  YDVGQCAWVDTGVLACNPADFSSVTADANGSASTSLTVRRSFEGFLFDGTRWGTVDCTTA 125

    Query: 123 ACNLG----AGN 130
               AC +G    AGN
    Sbjct: 126 ACQVGLSDAAGN 137

     sp|P41249|KEDA_ACTSL APOKEDARCIDIN
               Length = 114

     Score = 51.2 bits (120), Expect = 9e-07
     Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

    Query: 68  QCAPVG-GQDACNPATATSFTTDASGAASFSFVVRKSYTGST-PEGTPVGSVDCATA--A 123
               QCA +  G+ ACN A    F+  + G  + S VVR+S+TG   P+G  VG+VDC TA
    Sbjct: 36  QCAILADGRGACNVAEFHDFSL-SGGEGTTSVVVRRSFTGYVMPDGPEVGAVDCDTAPGG 94

    Query: 124 CNLGAGNSGLDLGHVALTFG 143
               C +  G +  + G+ A++FG
    Sbjct: 95  CEIVVGGNTGEYGNAAISFG 114

     sp|P01549|MACM_STRMA MACROMOMYCIN PRECURSOR (MCR) (AUROMOMYCIN APOPROTEIN)
               Length = 144

     Score = 48.8 bits (114), Expect = 5e-06
     Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

    Query: 64  YYIAQCAPVG-GQDACNPATATSFTTDASGAASFSFVVRKSYTGST-PEGTPVGSVDCAT 121
               Y++ QCA V  G   C+  T+T  T DA+G  +    V  S+       GTP G+V+C
    Sbjct: 63  YHVGQCAVVEPGVIGCDATTSTDVTADAAGKITAQLKVHSSFQAVVGANGTPWGTVNCKV 122

    Query: 122 AACNLGAGNSGLDLGHVALTF 142
                +C+ G G+   +    A+TF
    Sbjct: 123 VSCSAGLGSDSGEGAAQAITF 143

     sp|P53565|CDP_RAT CCAAT DISPLACEMENT PROTEIN (CDP) (CDP2)
               Length = 862

     Score = 31.3 bits (69), Expect = 0.91
     Identities = 17/39 (43%), Positives = 20/39 (50%)

    Query: 70  APVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGST 108
               AP  G+DA   ATA +  T+A GAA      R S   ST
    Sbjct: 764 APAAGEDAATSATAPAMATEAPGAARAGPAERSSALPST 802

     sp|P98160|PGBM_HUMAN BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE PROTEIN
                PRECURSOR (HSPG) (PERLECAN) (PLC)
                Length = 4393

     Score = 31.3 bits (69), Expect = 0.91
     Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

    Query: 69   CAPVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCATAACNL 126
                C   G  D C+P T        + A  F  +    Y G    GTP    DC   AC L
    Sbjct: 1565 CECNGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTP---EDCQPCACPL 1619

     sp|Q05793|PGBM_MOUSE BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE PROTEIN
                PRECURSOR (HSPG) (PERLECAN) (PLC)
                Length = 3707

     Score = 31.3 bits (69), Expect = 0.91
     Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 6/65 (9%)

    Query: 65   YIAQCAPV---GGQDACNPATATSFTTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCAT 121
                Y+ QC      G  D C+P T        + A  F  +    Y G    GTP    DC
    Sbjct: 1556 YLGQCELCECNGHSDLCHPETGACSRCQHNTAGEFCELCATGYYGDATAGTP---EDCQP 1612

    Query: 122  AACNL 126
                 AC L
    Sbjct: 1613 CACPL 1617

     sp|P53564|CDP_MOUSE CCAAT DISPLACEMENT PROTEIN (CDP) (HOMEOBOX PROTEIN CUX)
                Length = 1332

     Score = 30.5 bits (67), Expect = 1.6
     Identities = 17/39 (43%), Positives = 20/39 (50%)

    Query: 70   APVGGQDACNPATATSFTTDASGAASFSFVVRKSYTGST 108
                AP  G+DA   ATA +  T+A GAA      R S   ST
    Sbjct: 1234 APAAGEDAATSATAPATATEAPGAARAGPAERSSALPST 1272

     sp|P13608|PGCA_BOVIN AGGRECAN CORE PROTEIN PRECURSOR (CARTILAGE-SPECIFIC PROTEOGLYCAN CORE
                PROTEIN) (CSPCP)
                Length = 2364

     Score = 29.0 bits (63), Expect = 4.6
     Identities = 17/49 (34%), Positives = 26/49 (52%), Gaps = 1/49 (2%)

    Query: 87   TTDASGAASFSFVVRKSYTGSTPEGTPVGSVDCATAACNLGAGNSGLDL 135
                T + SG ++ +F V    +GS P  TP+ S D    + +L    SGLD+
    Sbjct: 1999 TPEVSGESTTAFDVSVEASGS-PSATPLASGDRTDTSGDLSGHTSGLDI 2046

     sp|P24856|ANP_NOTCO ANTIFREEZE GLYCOPEPTIDE POLYPROTEIN AFGP7/AFGP8 PRECURSOR
               Length = 822

     Score = 29.0 bits (63), Expect = 4.6
     Identities = 18/52 (34%), Positives = 24/52 (45%), Gaps = 4/52 (7%)

    Query: 81  ATATSFTTDASGAASFSFVVRKSYTGSTP----EGTPVGSVDCATAACNLGA 128
               ATA +  T A+ A +F+       T +TP      T   +   ATAACN  A
    Sbjct: 260 ATAATAATPATAACNFAATAATPATAATPALIFAATAATAATPATAACNFAA 311

     sp|Q90404|AGRI_DISOM AGRIN
               Length = 1328

     Score = 28.6 bits (62), Expect = 6.0
     Identities = 23/75 (30%), Positives = 33/75 (43%), Gaps = 6/75 (8%)

    Query: 65  YIAQCAPVGGQDACNPAT-ATSFTTDASGAASFSFVVRKSYTGSTP-EGTPVGSV--DC- 119
               Y   C+P  GQ +C P            G  +F  +V    +G TP    P+G+V  DC
    Sbjct: 87  YSKTCSPSSGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDEKSGCTPCNCYPLGAVRDDCE 146

    Query: 120 -ATAACNLGAGNSGL 133
                 +  C+  AG SG+
    Sbjct: 147 QMSGLCSCKAGISGM 161

     sp|Q04974|TVID_SALTI VI POLYSACCHARIDE BIOSYNTHESIS PROTEIN TVID
               Length = 831

     Score = 28.6 bits (62), Expect = 6.0
     Identities = 13/28 (46%), Positives = 15/28 (53%)

    Query: 113 PVGSVDCATAACNLGAGNSGLDLGHVAL 140
               PVG+V CA    NLGA      L H+ L
    Sbjct: 614 PVGTVYCARTLVNLGAWKDACTLAHMTL 641

     sp|Q03173|NDPP_MOUSE NPC DERIVED PROLINE RICH PROTEIN 1 (NDPP-1)
               Length = 389

     Score = 28.2 bits (61), Expect = 7.9
     Identities = 14/31 (45%), Positives = 17/31 (54%)

    Query: 106 GSTPEGTPVGSVDCATAACNLGAGNSGLDLG 136
               GS P G   GSV  A++  + G GN  L LG
    Sbjct: 229 GSFPGGGNTGSVSLASSKADAGRGNGPLPLG 259

      Database: Non-redundant SwissProt sequences
        Posted date:  Dec 28, 1999  4:33 PM
      Number of letters in database: 29,652,561
      Number of sequences in database:  82,258

    Lambda     K      H
       0.317    0.129    0.388

    Gapped
    Lambda     K      H
       0.270   0.0470    0.230

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 5349407
    Number of Sequences: 82258
    Number of extensions: 186930
    Number of successful extensions: 531
    Number of sequences better than 10.0: 14
    Number of HSP's better than 10.0 without gapping: 11
    Number of HSP's successfully gapped in prelim test: 3
    Number of HSP's that attempted gapping in prelim test: 502
    Number of HSP's gapped (non-prelim): 27
    length of query: 143
    length of database: 29,652,561
    effective HSP length: 50
    effective length of query: 93
    effective length of database: 25,539,661
    effective search space: 2375188473
    effective search space used: 2375188473
    T: 11
    A: 40
    X1: 16 ( 7.3 bits)
    X2: 38 (14.8 bits)
    X3: 64 (24.9 bits)
    S1: 41 (21.7 bits)
    S2: 61 (28.2 bits)